8 homologs were found in PanDaTox collection
for query gene Gbem_3842 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_3842  TPR repeat-containing protein  100 
 
 		 702 aa  1386    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3926  Tetratricopeptide TPR_4  94.24 
 
 		 694 aa  1248    Geobacter sp. M21  Bacteria  n/a    normal  0.0916918 
 
 
-
 
NC_009483  Gura_4217  TPR repeat-containing protein  39.37 
 
 		 684 aa  449  1e-125  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3116  tetratricopeptide TPR_4  35.4 
 
 		 700 aa  378  1e-103  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0406  TPR domain-containing protein  34.58 
 
 		 748 aa  346  8e-94  Geobacter sulfurreducens PCA  Bacteria  normal  0.754061  n/a   
 
 
-
 
NC_008609  Ppro_3422  TPR repeat-containing protein  32.78 
 
 		 713 aa  332  1e-89  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3308  Tetratricopeptide domain protein  32.34 
 
 		 714 aa  317  5e-85  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011126  HY04AAS1_0967  Tetratricopeptide TPR_2 repeat protein  27.33 
 
 		 890 aa  45.8  0.003  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.0000215323  n/a   
 
 
-
 
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