| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2817 |
|---|
| Symbol | |
|---|
| ID | 6782816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3244432 |
|---|
| End bp | 3244890 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642768811 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002139617 |
|---|
| Protein GI | 197119190 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG4119] Predicted NTP pyrophosphohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA GCGCCGGGCT CGTCATGTAC CGCTTCAAAG ATGAGCAACT GGAACTTTTC
CTGGTGCACC CCGGGGGGCC TTTCTGGGCC GGGAAAGACG AGGGAGCCTG GTCCATCCCC
AAGGGGGAGT ACCTCCCCGG CGAGGACCCT TTCGAAGTGG CCCGGCGCGA GTTTCTGGAG
GAGACCGGGC TTGTTGCTGA GGGGGAGTTC CTGGAACTTT CCGAGATCCG GCAGCCCGGC
GGCAAAAAAG TGAAGGCCTG GGCCTTTGCC GGGGACTGCG ACCCCTCCGC CATCACCAGC
AACACCTTCT CCCTGGAATG GCCGCCTCGC TCCGGGCGAT TTGCCGAGTT CCCCGAGGTG
GACCGGGCAG GCTGGTTCGA GTCCGGGGCC GCCAGGGTGA AGATACTCAA AGGACAGCTG
CCGCTAATAG AGGAACTCTG CCTGCTCATC AATTCTTAG
|
|---|
| Protein sequence | MKKSAGLVMY RFKDEQLELF LVHPGGPFWA GKDEGAWSIP KGEYLPGEDP FEVARREFLE
ETGLVAEGEF LELSEIRQPG GKKVKAWAFA GDCDPSAITS NTFSLEWPPR SGRFAEFPEV
DRAGWFESGA ARVKILKGQL PLIEELCLLI NS
|
|---|
| |