Gene Gbem_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2792 
Symbol 
ID6782791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3219612 
End bp3220313 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content48% 
IMG OID642768786 
ProductHNH endonuclease 
Protein accessionYP_002139592 
Protein GI197119165 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCTA AATTTTCGCA ACTTGTGGAA TTCGCTGAGC AGCATCAAGG GCGGCCGCTT 
TCGACTCTTG GGAACAGAAG CTCGTTCCTG CTGGAGGTGT CAGAATCCTC GTTTACATAT
ACTCCTGTTA CGACACAACG GCCCCGTCGC CAAAAGTTAA TCCATGCGGG GCGGGTTTTT
GAGCGTTACC TCGAGATCGG ATCATTGAAG ACCTCTAAGT ACACAGACCT CACGGTGAAC
TCTTCATACA TACTGGCCCT GATCAAGGCG TTCTCAGAGA AAGAACCGAC TATGAACGAA
GAGAAGGTGC ACGAATTTGC ATCTAATGCG ATTAATGATT TAGACGAAAT CCCGCAGGGG
GTGGCTGAGC CTGAAAGGAG TTCTCATACT ACATCTTCAT ACGCAAGGGA CCATAAGGTA
AGGGCTTATG TGATAGCGCG AGCAAAGGGT ACCTGTGAGT ATTGCGGTGA ACTTGGTTTT
CTGATGTCTA ATGGCAAGAG CTACTACCTG GAGGCACATC ATGTTATCGC CCTTGCTGAC
GAAGGTAGGG ATACCCCCGA TAACGTAATT GCTCTTTGCC CAAAGCACCA CAAGGAAGCA
CACTTCGGAA TCAATCGTGA TGAAATTGAA GAGGAAATGA TGATCTTTTT AAGCACTTTG
TCTAAAAAGG CGCGGAACAA TAGGGCTGCA CGCAGGCGCT GA
 
Protein sequence
MNSKFSQLVE FAEQHQGRPL STLGNRSSFL LEVSESSFTY TPVTTQRPRR QKLIHAGRVF 
ERYLEIGSLK TSKYTDLTVN SSYILALIKA FSEKEPTMNE EKVHEFASNA INDLDEIPQG
VAEPERSSHT TSSYARDHKV RAYVIARAKG TCEYCGELGF LMSNGKSYYL EAHHVIALAD
EGRDTPDNVI ALCPKHHKEA HFGINRDEIE EEMMIFLSTL SKKARNNRAA RRR