Gene Gbem_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1932 
Symbol 
ID6781922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2233210 
End bp2233956 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content59% 
IMG OID642767924 
ProductABC transporter related protein 
Protein accessionYP_002138742 
Protein GI197118315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00255017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAACAA GTAAGCGCAG AAAGATGGTC GAGGCGACCG AGATCGTGAA GATCTACGGT 
TCTTTCCGGG CTTTGGACCG GGTTTCACTG GACGTTTTCG ACGGCGAGAA GGTGGTCATC
ATCGGCCCCT CCGGGTCCGG CAAATCGACG CTGCTTCGAT CCATCAACAG GCTCGAGGAG
ATCGACCGGG GCAAGATGAT AGTGGACGGC ATGGATATCA TGGACCCCAA GACCGACATC
ACCAAGGTGC GCGAGGAGGT GGGGATGGTG TTCCAGTCCT TCAACCTTTT CCCGCACAAG
ACTGTGCTGG AGAACCTCAC CCTGGCGCAG ATTGTGGTCA GGAAGCGCTC CAAGTTCGAG
GCGGAAGAAA AGGCGATGAT GCTCCTGGAG AAGGTCGGGC TGGTGGCAAA AGCCAAGGCC
TACCCGGGGA ATCTCTCCGG CGGTCAGCAG CAACGCGTAG CTATCGCCCG CTCGCTTGCC
ATGGATCCGA AGATGCTCCT TTTCGACGAG CCGACCTCGG CGCTCGACCC CGAGATGATC
GGCGAGGTTT TGGACGTAAT GAAGGATCTC GCCAGGGATG GGATGACCAT GGCGGTGGTA
ACGCACGAGA TGGGTTTTGC CCGCGAGGTG GCGGACCGGG TGATCTTCAT GGACGCCGGG
AGGATCGTGG AGGAGGGGAC GCCGGAGCAT TTCTTCACCG CACCTTCCCA CGAACGCGCA
AAGCTGTTTT TAAGCCAGAT ACTGTAG
 
Protein sequence
MSTSKRRKMV EATEIVKIYG SFRALDRVSL DVFDGEKVVI IGPSGSGKST LLRSINRLEE 
IDRGKMIVDG MDIMDPKTDI TKVREEVGMV FQSFNLFPHK TVLENLTLAQ IVVRKRSKFE
AEEKAMMLLE KVGLVAKAKA YPGNLSGGQQ QRVAIARSLA MDPKMLLFDE PTSALDPEMI
GEVLDVMKDL ARDGMTMAVV THEMGFAREV ADRVIFMDAG RIVEEGTPEH FFTAPSHERA
KLFLSQIL