Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1932 |
Symbol | |
ID | 6781922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2233210 |
End bp | 2233956 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642767924 |
Product | ABC transporter related protein |
Protein accession | YP_002138742 |
Protein GI | 197118315 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00255017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCAACAA GTAAGCGCAG AAAGATGGTC GAGGCGACCG AGATCGTGAA GATCTACGGT TCTTTCCGGG CTTTGGACCG GGTTTCACTG GACGTTTTCG ACGGCGAGAA GGTGGTCATC ATCGGCCCCT CCGGGTCCGG CAAATCGACG CTGCTTCGAT CCATCAACAG GCTCGAGGAG ATCGACCGGG GCAAGATGAT AGTGGACGGC ATGGATATCA TGGACCCCAA GACCGACATC ACCAAGGTGC GCGAGGAGGT GGGGATGGTG TTCCAGTCCT TCAACCTTTT CCCGCACAAG ACTGTGCTGG AGAACCTCAC CCTGGCGCAG ATTGTGGTCA GGAAGCGCTC CAAGTTCGAG GCGGAAGAAA AGGCGATGAT GCTCCTGGAG AAGGTCGGGC TGGTGGCAAA AGCCAAGGCC TACCCGGGGA ATCTCTCCGG CGGTCAGCAG CAACGCGTAG CTATCGCCCG CTCGCTTGCC ATGGATCCGA AGATGCTCCT TTTCGACGAG CCGACCTCGG CGCTCGACCC CGAGATGATC GGCGAGGTTT TGGACGTAAT GAAGGATCTC GCCAGGGATG GGATGACCAT GGCGGTGGTA ACGCACGAGA TGGGTTTTGC CCGCGAGGTG GCGGACCGGG TGATCTTCAT GGACGCCGGG AGGATCGTGG AGGAGGGGAC GCCGGAGCAT TTCTTCACCG CACCTTCCCA CGAACGCGCA AAGCTGTTTT TAAGCCAGAT ACTGTAG
|
Protein sequence | MSTSKRRKMV EATEIVKIYG SFRALDRVSL DVFDGEKVVI IGPSGSGKST LLRSINRLEE IDRGKMIVDG MDIMDPKTDI TKVREEVGMV FQSFNLFPHK TVLENLTLAQ IVVRKRSKFE AEEKAMMLLE KVGLVAKAKA YPGNLSGGQQ QRVAIARSLA MDPKMLLFDE PTSALDPEMI GEVLDVMKDL ARDGMTMAVV THEMGFAREV ADRVIFMDAG RIVEEGTPEH FFTAPSHERA KLFLSQIL
|
| |