| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1583 |
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| Symbol | |
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| ID | 6781571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1835788 |
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| End bp | 1839207 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642767577 |
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| Product | aminotransferase class V |
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| Protein accession | YP_002138397 |
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| Protein GI | 197117970 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAGC ATAGCCGCGA GACCCGTAAC GGCATGTGCG GCATCTGCCC GGCAGGCTGC
CTGGTCACCG TGACCCTTGA ACAGGGGAGG CTGGTGGCGG TGGAGCCCCA GGCTGGAAGC
CCGATGGGTA TCCTCTGCCG TATCGGGCGC CACTCCCCGC AGATCGTGCA CGACCCGGAC
CGGCTCCTTT ATCCGCTCAA GCGCATAGGC CCCAAGGGGG GGTACGACTT CGAGCGCATC
ACCTGGGACG AGGCCTTCGA GACCATCGTG ACGCGGTTGA ACGAGGTGAA GGCGCGCTAC
GGGGCGGAGG GGGCGGCGAT CTACACCGGG CGCGGCAGCT TCGACATGGC CCTTTGCGAC
CTGTTCCAGC CGGCGGACGC CGCGGTTTCC TCAGCCTCCA ACGTTCTCTT TCCCTTTGGG
TCCCCAAACA CGCTTGGTGT GGGCGCCCTC TGCTACGTTT CCTTCGCCAT GATCGCCCCT
CACGTCACCA TGGGAGAGAT GCTGATCACC ATGGAGACCG ACCTCGAACA GTCGGAACTG
ATCGTGATCT GGGGCGCCAA CCCGGCTACC GATTCGCCTC CCCTGGCGCA CCGCCAGATC
CTGGCGGCAA GGGCGCGAGG GGCGCAGGTG GTCGCGATAG ATCCGCGGCT TGGGGAGACC
GCGCGGGAGG CGGGTGCTCA GTGGATCCCG ATTCGTCCCG GAACCGACGG GGCGCTGGCG
CTGGCCCTGA TCGGCGTCCT GGTGGAAGAG GAGCTTTACG ACGAGGCTTT TGCCCGCGAC
TGGACCGTCG GCTTCCCCGA ACTCCGTACG CTGGTGCAGC ACTTCCGTCC CGAAGCGGTG
CAAGAGATTT CGGGAGTCCC GGCGGATAAC ATCAGGAACC TGGCGCGCCG CATCGCCTCG
GTCCGGGGCG CGGCACCGGT CATGTACACG GGGCTTGAGT ACTCCGATAG CGGGGTGCAG
GCGATTCGCG CCGTCTTCAC GCTCTTCGCG CTGGCCGGGC AGCTCGACGT CCCCGGGGGA
GTGCTGTTCC GGATGAAAGA GAATATCTTC CCCCAGAACC GTTCCCGCCT GATTCGAAAC
CCGGATCTGA AGAAGGCGCT TGGGCGCGAC CGTTTCCCGA TCTACAGCGC CTACCGGGGC
GAATCCCATG CCGCCGTGCT CCCGGAGGCC GTGCTGGAAG GAAAGCCTTA TCCGGTGCGG
GCGCTACTGG TGCTGGGAGG CTCCATCATC ACCGCCTGGC CGGATCCGGA TCTGTGGCGC
CGGACCTTGT CCTCCCTCGA CTTCATGGTC TCCATCAACC GCTACCACAC GGCCGATTCG
GCCTATGCCG ACATCGTCCT CCCCGCCGCT ACCTATTACG AGATCACCTC CTACATGAGG
TACGGCCCGC TCTTCAAGAT AAGGGAGCGG CTGGTCCTCC CTCAGGGGGA GGCGCGTAGC
GACTTCCTGA TCCTGGCGGA GTTGGCCCGG CGCCTGGGGT ACGGCGAGCT GTACCCGCAA
AGCGAGGAGG AGATGCTCCG TTTCGCCCTT GAGGGGAGCG GCTTTTCCTT GGAAGAGGTG
CGGGCGCAGG GGGGGGAAGC GCGGGTTGCT GCCGTGATGA TGCAGTACAA GAAATGGGAA
AAGGGGCTGT TGCGTCCCGA CGGGAAACCC GGTTTCAACA CCCCCAGCGG CAAGTTCGAG
ATCGCCTCCT CCATCCTCGC GGAAAACGGC TACGCGCCGC TGCCGGTCTA CACCGAGCCT
GGGGAGGGGC CGCTTGCCGA CCCGCAGCTG GCACGTGAAT ACCCGCTGGT ATTCAACTCC
GGCGCGCGTA CGATGCACGA TTTTCGCAGC CAGCACCACG GCGTGCGCGA CCTGTCCGAC
CCGCTTCCCG AGCCGCCGGT CACCTTGAAC CGGGAAGATG CGGCAGAGCT CGGGGTCGGG
GAGGGGGAGC GGGTCTGGGT CGAGACCCCG AGGGGGCAGG CACTTTTTAC AGCAAGGCTA
ACCAGCGGCA TCGTGCGCGG GAGCATCGAC GCCGCCATGG GAGGGGGAGG GCCGTTGGGT
TCCGAGGCCT GGCAAAAGTG CAACGTGAAC CAACTCACCG ACCCCGGCCG CTACGATCCC
ATCTCCGGCT TCCCCGTCTA CAAGACCCTT CTCTGTCGAG TGCGCAAGGC AGAGACTTTC
GTTGCCGACT CCGCCAGTTC CAAGTCGTCC ACCGGGTCCA TTGAGTCCAT CGGGTCCACC
TTCACCGAAG GGCTAACCCC GGCCGTCGTT GCTTTGCGCC AGGTCTACCT GGACCACAAC
GCCACCACAG AGGTTCGCCC GGAGGTGCGG GAGGCGATGC TCCCTTACCT TGGCGGCGAC
TGGGGGAACC CTTCCAGCAT CCACGGCAAG GGGAGCCGCG CCCGCTTTGC GCTGGAGGAT
GCCCGGCGCC AGGTCGCTCA AGCGCTCAAC TGCACCGCCC GGCGCATCGT CTTCACCGGA
GGGGGGTCCG AGGCGGACAA CCTCGCCCTG CGCGGAGCGG CGCTGGCTGC AGACGGCTCC
AGGCGCCACC TGGTGACCAG CAGCATCGAG CACCCCGCCG TACTCGCCAC CTGCCGCGCC
CTCTCCCGCC AGGGGTACGA ACTGAGCGTG TTGGACGTGG ACCGGGAGGG GGTGGTGCAG
CCGGAACAGC TGGAGCGGGT GATCCGCCGG GACACCCTGC TGGTCTCGGT GATGCTCGCC
AACAACGAGA CGGGGGCGCT TCAGCCCGTG CCCGAACTGG CGCGGATTGC ACATCGGATG
GGGGCGCTCT TTCACTGCGA CGCGGTGCAG GCGCTGGGCA AGATGGAACT GGACCTGGAG
CAGTTGGGGG CGGATCTGGT CAGCCTCTCC TCCCACAAGG TCCACGGTCC CAAAGGGGTG
GGTGCACTCT ATATCGGTCG GGAGGTAAAA CTGGAGCCGA TCATCACCGG CGGAGGGCAG
GAGCACGGGC TTCGGGCCGG GACCGAAAAC GTTCCCGGGA TCGTCGGTTT CGCCAAGGCA
GTGGAGCTTT CGCAGGCGGG GCTCTTCGCC GGCGAGCCGG AGCGGCTGGC GCGGCTTCGC
GACCGGCTGG AGCAGGGAAT TCTCGGCATA GTACCCGGCG CGAGTAAAAA CGGCCCGGAA
AAGCGGCGCC TTTGCAACAC GCTCAACATG CAGCTGCCGG GGATCCGCGG CGAGTCGCTG
GTGTTGCTGT TAGATCGCCA CGGGGTGGCG CTATCGTCCG GCTCCGCCTG CAAGTCCGGA
AACCCGGACC CTTCCCACGC GTTGCTTGCC ATGGGGCTCA CGCCGCAGCA GGCACACTGC
TCCGTCCGTT TTTCCCTGGG ACGGGCAAAC GACGACGGGG AGATAGAGTA CGTGCTGGAT
CGTCTGCGGG AGCTGTTGCG GGATACCGGC CAGGCGGTGC GTTTCGTAGC CTGCCGCTGA
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| Protein sequence | MSEHSRETRN GMCGICPAGC LVTVTLEQGR LVAVEPQAGS PMGILCRIGR HSPQIVHDPD
RLLYPLKRIG PKGGYDFERI TWDEAFETIV TRLNEVKARY GAEGAAIYTG RGSFDMALCD
LFQPADAAVS SASNVLFPFG SPNTLGVGAL CYVSFAMIAP HVTMGEMLIT METDLEQSEL
IVIWGANPAT DSPPLAHRQI LAARARGAQV VAIDPRLGET AREAGAQWIP IRPGTDGALA
LALIGVLVEE ELYDEAFARD WTVGFPELRT LVQHFRPEAV QEISGVPADN IRNLARRIAS
VRGAAPVMYT GLEYSDSGVQ AIRAVFTLFA LAGQLDVPGG VLFRMKENIF PQNRSRLIRN
PDLKKALGRD RFPIYSAYRG ESHAAVLPEA VLEGKPYPVR ALLVLGGSII TAWPDPDLWR
RTLSSLDFMV SINRYHTADS AYADIVLPAA TYYEITSYMR YGPLFKIRER LVLPQGEARS
DFLILAELAR RLGYGELYPQ SEEEMLRFAL EGSGFSLEEV RAQGGEARVA AVMMQYKKWE
KGLLRPDGKP GFNTPSGKFE IASSILAENG YAPLPVYTEP GEGPLADPQL AREYPLVFNS
GARTMHDFRS QHHGVRDLSD PLPEPPVTLN REDAAELGVG EGERVWVETP RGQALFTARL
TSGIVRGSID AAMGGGGPLG SEAWQKCNVN QLTDPGRYDP ISGFPVYKTL LCRVRKAETF
VADSASSKSS TGSIESIGST FTEGLTPAVV ALRQVYLDHN ATTEVRPEVR EAMLPYLGGD
WGNPSSIHGK GSRARFALED ARRQVAQALN CTARRIVFTG GGSEADNLAL RGAALAADGS
RRHLVTSSIE HPAVLATCRA LSRQGYELSV LDVDREGVVQ PEQLERVIRR DTLLVSVMLA
NNETGALQPV PELARIAHRM GALFHCDAVQ ALGKMELDLE QLGADLVSLS SHKVHGPKGV
GALYIGREVK LEPIITGGGQ EHGLRAGTEN VPGIVGFAKA VELSQAGLFA GEPERLARLR
DRLEQGILGI VPGASKNGPE KRRLCNTLNM QLPGIRGESL VLLLDRHGVA LSSGSACKSG
NPDPSHALLA MGLTPQQAHC SVRFSLGRAN DDGEIEYVLD RLRELLRDTG QAVRFVACR
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