Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1560 |
Symbol | |
ID | 6781548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1809060 |
End bp | 1810130 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642767554 |
Product | peptidase M24 |
Protein accession | YP_002138374 |
Protein GI | 197117947 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0956578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATAG ACAGAATCTC TGCGGCCAGG GGGTGCCTCG AGCGGGTCGG AGGCGACCTG CTGCTGGTCA CAAACCTCAG TAATATCAGA TACCTTACCG GGTTCACCGG CAGCGAGGCG CTGCTGGTTC TCTCGCCAGA CGACGGATGG TTTCTGACCG ATTCCCGTTA CACCTCCCAG GCCGGCGCCG AAGTCACAGG CGCAAGAGTT GCCGAGTTCT CCAACAAGAT GGAATCGCTG GTCGAGTTGC TGCAAAAGCT GCAGCCGTCC AAGGTAGCCT TCGAGGCGGC CCACACCATG GTTGCCGTCT ACCTGGAGCT CTGCAGCAAA ACGCCGCAGA TCGAATACCT TCCGGCGGAC GCCGAGATGA CGGCGCTGCG CAGCGTCAAG GACGCCGGCG AGCTGGAGAT CCTGGAAAGG GTGGCCGCGA TCGCGTCGGA GTCGCTTTTG GAGACGCTGG CGCGGGTGAC CCCCGGCATG ACCGAGGGCG AGGCCGCCTG GATGCTGGAG GTTGCCATGA GGGAGAGGGG GGCGGAGAAC AAGTCCTTCG ACTTCATCGT CGCCTCCGGC GAGCGGGGCG CGCTTCCCCA CGGCAAGGCG TCCGGGAAGC GGCTCGCAAA AGGGGAACTG ATCACCTTCG ACTACGGCGC CATCTACGGC GGTTACTGCT CCGATGAGAC GGTGACCGTT TCATTGGGCG AGCCGGACAG CCGGCAGCGC GAGGTCTACG AGACCGTGCT GGGCGCCCAA CGCGCCGCCA TGAACGCCGT TCACCCGGGG CTGAGCTTCA GGGACCTTGA CGCTGTGGCA AGGGATTACA TCGCCTCGCG CGGCTTTGGC GAGTACTTCG GGCATGGGCT CGGGCACGGC GTGGGCATAG ATATTCATGA ACACCCGGCG GCATCGCCGC GCAGCAAGAA CGTGATCCAG GAGGGTATGG TATTCACCAT CGAGCCCGGG ATCTACATCT CGGGATGGGG CGGGGTAAGG ATCGAGGACA CCGTGGTCGC CGAGTCCCAT GGTTGCCGCT GCATCACCAA GGTCCCCAAG GACCTGATCG TATTGCCGTG A
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Protein sequence | MVIDRISAAR GCLERVGGDL LLVTNLSNIR YLTGFTGSEA LLVLSPDDGW FLTDSRYTSQ AGAEVTGARV AEFSNKMESL VELLQKLQPS KVAFEAAHTM VAVYLELCSK TPQIEYLPAD AEMTALRSVK DAGELEILER VAAIASESLL ETLARVTPGM TEGEAAWMLE VAMRERGAEN KSFDFIVASG ERGALPHGKA SGKRLAKGEL ITFDYGAIYG GYCSDETVTV SLGEPDSRQR EVYETVLGAQ RAAMNAVHPG LSFRDLDAVA RDYIASRGFG EYFGHGLGHG VGIDIHEHPA ASPRSKNVIQ EGMVFTIEPG IYISGWGGVR IEDTVVAESH GCRCITKVPK DLIVLP
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