Gene Gbem_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1559 
Symbol 
ID6781547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp1808588 
End bp1809037 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID642767553 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002138373 
Protein GI197117946 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.897026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAC CAGACGTGAG GATATTGGTC CTTCACGGAC CGAACCTGAA CCTGCTCGGC 
ACCCGCGAGC CGGGGGTCTA CGGCACCACA ACGCTAAAGG GGATCAACCA GTCGCTCATG 
GCGCTTGCCT CTGAGTTCTC GCTGGAGCTG CGCATCCTGC AGACCAATTC GGAAGGGGCC 
ATGGTCGACG CCATCCAGGG AGCCATGGCG GATTGCCAGG GAATCCTCAT CAACCCTGCT 
GCCTACACCC ATACCAGCGT CGCCATCCGC GACGCCATCG CCGCAGTGGC GCTCCCCGCT 
GTGGAAGTGC ATCTCTCCAA CGTCCACGCC AGGGAGCCCT TCAGAAGCCA CAGTTACATA 
GCTCCGGTTG CAGTGGGTCA GATCTGCGGA TTCGGCGCCA TCAGCTACCT TTTAGGACTG 
CGTGCACTCG CGGAGCGGCT GGGAAAATAA
 
Protein sequence
MTKPDVRILV LHGPNLNLLG TREPGVYGTT TLKGINQSLM ALASEFSLEL RILQTNSEGA 
MVDAIQGAMA DCQGILINPA AYTHTSVAIR DAIAAVALPA VEVHLSNVHA REPFRSHSYI 
APVAVGQICG FGAISYLLGL RALAERLGK