Gene Gbem_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1188 
Symbol 
ID6781168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1381499 
End bp1381984 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content51% 
IMG OID642767175 
ProductRubrerythrin 
Protein accessionYP_002138003 
Protein GI197117576 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.20623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAT TCGATTGTGC TATCAAAAGA GAGGAAGACA CCAGGACGTA CTTCGAGGGA 
CTGGTAGAAA AAGCTACAGA TCCTGAGCTA AAGACCCTTT TCTCAATGCT GGCCGACTGC
GAGGATGAAC ATAGGAAGAG ACTGCTGGAC CTCAAGAAGG GTATGGAGAG CAAGACGACG
GTGCTCGCAG ACCTCGACGT TTCAGTCTGC AGCTACCGCC CCTTCCTTAC TCAGAGCGAA
CTGCTTGAGG AAAAGGACAA GGACCCGGAC CTGTATCTGT TCACCGTTAA AAAGGAGGAG
CAGGATATCA CCTTTTATCA AGAACTGGCA GCAAGGGCCA GGGACGAACA GACCCGCAAG
AGCCTGCTCA TGCTGGCGGA CGAGGAACGC CGCCACCTGG AACGGATGGA GGAAATTTAT
GCCTTCGTGG AAACTCCAAG GACCTACCTG GAAAACGGTG AATTCAGCAA TCTGAGAACA
CTGTAG
 
Protein sequence
MNVFDCAIKR EEDTRTYFEG LVEKATDPEL KTLFSMLADC EDEHRKRLLD LKKGMESKTT 
VLADLDVSVC SYRPFLTQSE LLEEKDKDPD LYLFTVKKEE QDITFYQELA ARARDEQTRK
SLLMLADEER RHLERMEEIY AFVETPRTYL ENGEFSNLRT L