Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1040 |
Symbol | |
ID | 6781018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1211658 |
End bp | 1213430 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642767027 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002137857 |
Protein GI | 197117430 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGATAC CAACAAGCAA AATACCGGTC GTCGTCCTTC TCAGCGCGGT GAGCATCGCG CTGGTGATGA TGGCGTCAAG CCACCTCATG CTCGGGCAGA TCCGGGAGGA GGCCGTGCGC CAGGCCACCA GGCAGCAGGA AAGCAGCATG TCGGCCCTGT GGGAGCAGAT GGCGCGCCGC GGCAGGAACT TCCGCATCGA GGACGGCAAG CTCTACGTCG GGGACTACTA CGTCCTGAAC GACAACAACG AGATTCCGGA CCGCATCTTC GCCATCACCG GGAGCAGGGC CACCATCTTC ATGGGAGACA TCCGGGTCGC CACCAACATC ATGCGGTCCG ACGGCACCCG CGCGATAGGG ACAAAGATGA TCGGCCCCGC CTATCAGGCC ATCTTCGGCG AGGGAACCAG CTACCGCGGC GAGGCCGATA TCCTCGGCAT CCCCTACTTC ACCGCCTACG ACCCGGTGCG GGACATGCAC GGCAAGACCA TCGGCGCCCT CTTCGTGGGG GTGAAGCAGA GCGAGTACCT GGCCCGCTAC GACAGCATCA ACCTGAAAAT CCGCGCCATC AGCGTGATGC TGGCAGCGAT CTTCGTCCTT ATGGCTGTGC TTTTGATCCA GGTCCGCAAG AAAAGCGAGA TCGCGGCACA GCAGCAGCTC GCCTTCCAGC AGCTGCTTTT GGACACCATA CCCAGCCCGA TCTTTTCCAA GGACGCCCAA GGGCGCTACA ACCTCTGCAA CAAGGCCTTC CAGGAGTACG TGGGGGTGCC GAGCGAGGAG CTTTTGGGGA AGACGGTTTT TGACCTTTGG CCCAGGGAGC TGGCGGAGCA GTACCAGCGC ATGGACCAGG TCATCATGGA AAGCTCCGGA ACGCAGATCT ACGAGTCGCA GGTCAAGTAT GCGGACGGCA CCCTGCACGA CGTGCTCTTC CACAAGGCGG CTTTCCGGGA CGAGAAGGGG ACCCCCGCCG GGCTGGTCGG CGTCATCCTG GACATCACGG AGCGCAAGGA GGCCGAGATG GAGAACAGCA GACTCGCGGC GCAGATGCAC CAATCCCGGA TGGTAGAGTC GCTGATGATC CAGCTGAACC ACGACCTGAA CACCCCGCTT ACCCCCCTGT TCGCCCTGCT CCCCATGATT GAGAAACAGG TGGACGACCC GGGGCTTAGG AGAATGCTGG AGATCTGCCA GCAGTGCGCA AACCAGATCA AGGGGCTGGC CGAGAAGTCC CTGGACCTGG TCCGGATCTC GTCCGGCCGC CCGCAGCTGA TCCCGGTCAG GCTCGCCGGC ACGGCGGAGT TCGCGTGCGG CGAAGTCGCG GACTCCCTGG CGCTGCGCGG CGTGACCTGC CACAACGACA TCCCCGCCGA CCTGTGGGTC TTGGGAAGCG CGGAACAGCT CTCACTGCTC TTCAGGAACC TGCTCACCAA TGCCGCGCGC TACGCCCGTG CCAACGGGCA CATCGTGCTG GGGGCCGCGC CCATGGACGG CATGGTGCAG GTCTGCGTCC AGGACGACGG CGAGGGGCTG GACCAGGAGC ACTTGGCCCT GGTCTTCAAC GAGTTCTTCA AGGCCGATCC GGCCCGCCAG GACGTGAACA CGCAAGGGCT GGGGCTGGCC ATCTGCAAGC GGATCATCGC CAACCACGAC GGCAGGATCT GGGCCGAGAG CCCCGGCAAG GGGCAAGGGA CCACCATCTT CTTTACGCTT AACCCCGCCG GCGATGCGCC GGAGGAAGCC AAACCCGATC ATCCGGAGAG TTACGACATA TGA
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Protein sequence | MRIPTSKIPV VVLLSAVSIA LVMMASSHLM LGQIREEAVR QATRQQESSM SALWEQMARR GRNFRIEDGK LYVGDYYVLN DNNEIPDRIF AITGSRATIF MGDIRVATNI MRSDGTRAIG TKMIGPAYQA IFGEGTSYRG EADILGIPYF TAYDPVRDMH GKTIGALFVG VKQSEYLARY DSINLKIRAI SVMLAAIFVL MAVLLIQVRK KSEIAAQQQL AFQQLLLDTI PSPIFSKDAQ GRYNLCNKAF QEYVGVPSEE LLGKTVFDLW PRELAEQYQR MDQVIMESSG TQIYESQVKY ADGTLHDVLF HKAAFRDEKG TPAGLVGVIL DITERKEAEM ENSRLAAQMH QSRMVESLMI QLNHDLNTPL TPLFALLPMI EKQVDDPGLR RMLEICQQCA NQIKGLAEKS LDLVRISSGR PQLIPVRLAG TAEFACGEVA DSLALRGVTC HNDIPADLWV LGSAEQLSLL FRNLLTNAAR YARANGHIVL GAAPMDGMVQ VCVQDDGEGL DQEHLALVFN EFFKADPARQ DVNTQGLGLA ICKRIIANHD GRIWAESPGK GQGTTIFFTL NPAGDAPEEA KPDHPESYDI
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