Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_2167 |
Symbol | |
ID | 7976973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2229844 |
End bp | 2231469 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644798983 |
Product | GerA spore germination protein |
Protein accession | YP_002950143 |
Protein GI | 239827519 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.087983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTTTT TTAAAGAAAG GAAGAAAAGA AAACAAATCA TAAAGAAACA AGAACAAGAT CAAAAACAAC AGAACCAAAA TCAGCAACAA CAGGACTTTC TTTCTACCGA CTTAAATAAA AATCTGCAAA AACTGCAAAA TATCTATCAA AATTGTATGG ATGTCGTTTT TCGCCCATTT CAAATTGGTG GAAAAACAAA GGCTGCCCTT ATTTATATCG ACGGTTTAGC TGACATCAAA GAAATCGATG CGGGCGTGCT CACCCCTTTG ATGAAAGAAA ATAATGCCAA GGAGAATACC GATCAGTTCA TTCATGTCAA TCATATACTA GAACAAAAAT TGACCGTTTC TAAGGTAAAG AGAGTACAAA CAATAACAGA GTGCATTGAA CAGATCTCTG GTGGAAATCC GGTCTTGCTT ATCGATCAAC AAAGCGAAGG ATTCGCTTTA GGTTTGGCAC ATTGGGAAAA ACGTTCCATC GAAGAACCGG TGGGGGAATC TGTGATAAGG GGGCCGCGGG AGGGCTTCAC CGAATCATTA GGGACTAATC TTGCTTTGTT GCGCAGAAAA ATAAGAAGCC CGCAGCTGAA AACAAAATCA ATGAAAATTG GCAAGTACAC CCAGACTGAA GTAGTTATCT CTTATATTGA AGGGATTGCC GAGCAAACGT TAATCCAGGA AATAGAGGCC CGGCTTAACC GTATCAAGGT AGATGGCATT TTGGAAACGA GCTATATTGA AGAGTTTATC GAGGATAATC CTTATTCCCC ATTTCCTCAA GTCTTGAATA CCGAACGGCC TGATGTGGTG GCGGCAAACC TGCTTGAAGG ACGAGTAGCG ATTTTTCAAG ATGGCACTCC TTTCGTTTTG ATTGTGCCGG TTTCTTTTTA TTCCTTGCTG CAATCAAATG AAGATTACTA TCAACGATCC TTAATGAGCA CGGCAACCCG CTGGCTGCGT TACATATTTC TTTTGATATC TCTTTTACTG CCGTCGTTGT ATGTGGCGCT CCTTACTTTT CATCAGGAAA TGCTTCCTAC TACACTTTTG ATAACCATTG CCACTTCTCG GGAGAAAGTT CCCTTTCCGG CGCTGGTCGA AGCCGTGCTC ATGGAATTAG CATTTGAGGC CATACGTGAA GCGGGGGTGA GGCTTCCTAA ACAAGCGGGT GCCGCGGTTA GTATCGTTGG TGCGCTGGTG ATTGGGCAAG CTGCGGTCCA AGCAGGTCTT GTTTCTGCTC CACTGATCAT GGTAGTTGCT TTGACAGGGA TTGCTTCTTT TACCTTCCCG CGCTATACGG CTGGAATGGC ATTAAGGTTG CTGCGCTTTC CCATGATCTT TTTGGCAGGG ACGTTAGGGC TTCTCGGGAT TATGCTTGGG CTGCTTATGA TTGTTACTCA TATGGCGACG CTCCGTTCTT TCGGCGTTCC CTACTTATCT CCGATGGCTC CAATACAAGG GGGCGAAATG AAAGACGTGC TGCTGCGCGC GCCTTTTTGG AAGTTCAATA CACGCCCTCA TTTAACGGGA GCGGATAATA ATATCGAGCG GCAAGGTCCG AATCAGAGAC CGAGTCCTGA TTACGGAGAT GACAAGACGA GTAAAGGCAA AGGAGGACCA TTATGA
|
Protein sequence | MFFFKERKKR KQIIKKQEQD QKQQNQNQQQ QDFLSTDLNK NLQKLQNIYQ NCMDVVFRPF QIGGKTKAAL IYIDGLADIK EIDAGVLTPL MKENNAKENT DQFIHVNHIL EQKLTVSKVK RVQTITECIE QISGGNPVLL IDQQSEGFAL GLAHWEKRSI EEPVGESVIR GPREGFTESL GTNLALLRRK IRSPQLKTKS MKIGKYTQTE VVISYIEGIA EQTLIQEIEA RLNRIKVDGI LETSYIEEFI EDNPYSPFPQ VLNTERPDVV AANLLEGRVA IFQDGTPFVL IVPVSFYSLL QSNEDYYQRS LMSTATRWLR YIFLLISLLL PSLYVALLTF HQEMLPTTLL ITIATSREKV PFPALVEAVL MELAFEAIRE AGVRLPKQAG AAVSIVGALV IGQAAVQAGL VSAPLIMVVA LTGIASFTFP RYTAGMALRL LRFPMIFLAG TLGLLGIMLG LLMIVTHMAT LRSFGVPYLS PMAPIQGGEM KDVLLRAPFW KFNTRPHLTG ADNNIERQGP NQRPSPDYGD DKTSKGKGGP L
|
| |