| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1964 |
|---|
| Symbol | |
|---|
| ID | 7979487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2025848 |
|---|
| End bp | 2026636 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644798791 |
|---|
| Product | protein of unknown function DUF990 |
|---|
| Protein accession | YP_002949961 |
|---|
| Protein GI | 239827337 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000269589 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGAT ATGCGCGGAT TTTTCGCGAA TTTTTCCGAA CGTGTTTCGT CGAAGAACTG
GAATATCGAA GCGAGTTTCT TGGCAATTTG CTGTCCAGCT TTTTTGGCAT TGGGATTGCG
ATTTTGACGG TAAATATCTT TTTTTACCAA ACTGATCAAT TAGCGGGCTG GACATATGCT
GATGTGCTTG TCTTGCTTGG CGTCTTTAAT ACGCTCAGAG GGCTGATTGA TTTTGCGCTT
CGCCCGAATA TGCCGCGCTT ATTAGAACAT GTCCGAAAAG GGACGTTGGA CTATATTTTA
ACAAAACCAG TCGACAGCAT GTTTTATGTC AGCTTTCGTC ATTTAGTATT TTGGCGGCTG
ATTGATGTTT TGCTTGGTCT TGGAGTCATC GGCTACGGAT TAGTAGAAAA GCATTATATT
CCGTCACTAG TGGATGTGGC CGTTTTTATC ATGACGATCG CTGCTTCATT TGTGTTAATT
TATTCGTTAT GGATGATGTT GATGACGACA TCGTTTTGGG TCATCCGCAT TGATGATTTA
TCGTTTATTT TTGATTCGTT TTTTGAAACA GCAAGATTTC CGATCGGCAT GTACCGTGGC
TGGGTGCGCA TCGTGCTGAC ATATGTACTG CCTGCCGCAG TAATCACGAA CATGCCTGCA
TTGTCGCTGT TAGGGAAGTG GAACATTGTT ACCGCGCTGA TATCCGTTGT GCTCGCTGGC
GTCTTTTTAT GGCTGTCACG CCGCTTTTGG CGTTTTGCGC TTCGCTTTTA TACGAGCGCG
AGCAGTTAA
|
|---|
| Protein sequence | MRRYARIFRE FFRTCFVEEL EYRSEFLGNL LSSFFGIGIA ILTVNIFFYQ TDQLAGWTYA
DVLVLLGVFN TLRGLIDFAL RPNMPRLLEH VRKGTLDYIL TKPVDSMFYV SFRHLVFWRL
IDVLLGLGVI GYGLVEKHYI PSLVDVAVFI MTIAASFVLI YSLWMMLMTT SFWVIRIDDL
SFIFDSFFET ARFPIGMYRG WVRIVLTYVL PAAVITNMPA LSLLGKWNIV TALISVVLAG
VFLWLSRRFW RFALRFYTSA SS
|
|---|
| |