Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3031 |
Symbol | |
ID | 2688506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3337484 |
End bp | 3339019 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637127724 |
Product | sigma-54 dependent transcriptional regulator |
Protein accession | NP_954073 |
Protein GI | 39998122 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACATTTA ATGCATACAT ACTATACATA AAATGCATGA CGCGTTTAAC AGCCATCCTG CATTCCGAGC GTGAGTTTTT CAGCCGGGTC GCCCGGGCCG CCTTTCTCAA CCCCTTCAGC GAAAGCCGGG ATGAGCTTGA CCAGTCCCTG GCCGGAAACG ATGTCGACCG CAAAGGCGCG CTGGATGCCG CCATAGCCCG CGTGGCGGAC CGCTCCGCCG CCCTGCGGGA AGCCCTGAGC GGCAGTCTGA CCCGCGTCCC AGTCTCAGAG AGGGAAACGA TACGAACGGT GCTCCTCTTT GATCTGTACC ACCGTTTTCT CGACGATTTC GACCGGCTGA TCCGCGACCA GGCCGCGGCC GGCGACACGC CCTGCCCCGT CCCCTTTGCC GGGAAATTCC AAGCCGCATT CGACGAGGCG GGATTCCCGG GTGGTGAAAG TCGCCGCTAT CTTGCCCTCT TCTACCAGAT TCGCCGGGCC TTTTACTTCA TCCGCGAGGG ACTTGCCGGC TCCAGCGCTT CCCTGCGGCG GGTGCGCGAA CATCTCTGGC AGACCCTTTT CACCCACAAC ATCCGTTGGT TCGAGCAGCA TCTCTGGGAC CGCATGGAGG ACTTTTCCGT TCTGATCCTC GGGGAGACCG GCACCGGCAA GGGCACAGCT GCTGCGGCCA TCGGCCGTTC GGGGTTCATC CCCTTTGACC CGGGAAGCGG CCGGTTCAGC GAGAGTTTCA CCCGCAACTT TCTGGCGGTG AACCTGTCCC AGTACCCGGA GGGAATTCTG GAGTCAGAGC TCTTCGGCCA CCGGAAGGGA GCCTTTACCG GTGCCATTGA CCACCACGAG GGTGTCTTCA GTCGTTGCAC TCCCCACGGC GCCATATTCC TGGACGAGAT AGGCGAGGTT TCACTGCCGG TACAGGTAAA ACTTCTACAA GTGGTGCAAG AGCGGATTTT CTCCCCCGTG GGAAGTCACC AGCGGCTCCG CTTCAGCGGA CGGCTCATCG CGGCCACCAA TCGAGACCTG ACCCGCCTGC GCCAAGAGGG AGCGTTCAGG GATGACTTCT ACTACCGTCT TTGTTCGGAT GTCATCACCA TTCCGCCTTT ACGGCAGCGG GTACGGGAGC GCCCCGAGGA ACTGAACGAG CTCATCGCTG GCATCCTCCG CCGACTGGCG GGTGCTGCTC CGGACAAGGA GGTACAAGTG CTGCGTCGGG CCATCGAGCG CGATGTGGGG AAAGAGTATC ACTGGCCGGG GAATGTGCGG GAACTGGAGC AGGCGGTACG GCGGGTGCTG GTGACGGGAC ACTACCGGGG TGAGGCGAAA CCGGAACCGG CCGGTGACTT GCCGCGGTAT CTCAAAGAGG CGGCAGAGAG GGAGTGTGAC GCTCAGGAAC TGCTGGCAGG ATATTGTCGC CTGCTCTATG AACGCCACGG GACTTTCGAG GAGGTGGCGA GGCGGGCCAA TCTCGACCGG AGAACCGTGA AAAAGTACCT GCAGCGGGAG CAGTGCGCCC GCGGCGATAA TCGTGGCCGG CCCTAG
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Protein sequence | MTFNAYILYI KCMTRLTAIL HSEREFFSRV ARAAFLNPFS ESRDELDQSL AGNDVDRKGA LDAAIARVAD RSAALREALS GSLTRVPVSE RETIRTVLLF DLYHRFLDDF DRLIRDQAAA GDTPCPVPFA GKFQAAFDEA GFPGGESRRY LALFYQIRRA FYFIREGLAG SSASLRRVRE HLWQTLFTHN IRWFEQHLWD RMEDFSVLIL GETGTGKGTA AAAIGRSGFI PFDPGSGRFS ESFTRNFLAV NLSQYPEGIL ESELFGHRKG AFTGAIDHHE GVFSRCTPHG AIFLDEIGEV SLPVQVKLLQ VVQERIFSPV GSHQRLRFSG RLIAATNRDL TRLRQEGAFR DDFYYRLCSD VITIPPLRQR VRERPEELNE LIAGILRRLA GAAPDKEVQV LRRAIERDVG KEYHWPGNVR ELEQAVRRVL VTGHYRGEAK PEPAGDLPRY LKEAAERECD AQELLAGYCR LLYERHGTFE EVARRANLDR RTVKKYLQRE QCARGDNRGR P
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