7 homologs were found in PanDaTox collection
for query gene GSU2590 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2590  hypothetical protein  100 
 
 
368 aa  765    Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1811  hypothetical protein  38.61 
 
 
236 aa  62  0.00000002  Treponema denticola ATCC 35405  Bacteria  normal  0.0693718  n/a   
 
 
-
 
NC_007517  Gmet_2490  hypothetical protein  36.63 
 
 
265 aa  58.9  0.0000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4562  hypothetical protein  29.9 
 
 
158 aa  45.4  0.001  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00288607  normal  0.0239285 
 
 
-
 
NC_007355  Mbar_A0226  hypothetical protein  29.21 
 
 
266 aa  45.1  0.002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.481584  normal  0.43543 
 
 
-
 
NC_009092  Shew_2604  restriction endonuclease  21.9 
 
 
266 aa  44.3  0.004  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1083  hypothetical protein  31.18 
 
 
239 aa  42.7  0.01  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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