12 homologs were found in PanDaTox collection
for query gene GSU2348 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2348  hypothetical protein  100 
 
 
98 aa  200  6e-51  Geobacter sulfurreducens PCA  Bacteria  normal  0.0334882  n/a   
 
 
-
 
NC_011899  Hore_12220  uncharacterized integral membrane protein  31.52 
 
 
115 aa  52  0.000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000214292  n/a   
 
 
-
 
NC_013501  Rmar_1869  hypothetical protein  35 
 
 
98 aa  50.8  0.000006  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0755  protein of unknown function DUF1049  27.4 
 
 
95 aa  47.8  0.00005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1682  hypothetical protein  32.61 
 
 
119 aa  47.4  0.00006  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00011162  normal  0.0658784 
 
 
-
 
NC_007614  Nmul_A2295  hypothetical protein  27.96 
 
 
100 aa  46.2  0.0002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1917  hypothetical protein  29.87 
 
 
106 aa  44.3  0.0005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1616  hypothetical protein  32.89 
 
 
129 aa  43.5  0.0009  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1423  hypothetical protein  30.1 
 
 
117 aa  43.1  0.001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.000000706417  n/a   
 
 
-
 
NC_007614  Nmul_A2067  hypothetical protein  35.62 
 
 
124 aa  40.8  0.007  Nitrosospira multiformis ATCC 25196  Bacteria  hitchhiker  0.000373882  n/a   
 
 
-
 
NC_011206  Lferr_0480  hypothetical protein  32.39 
 
 
117 aa  40.4  0.008  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00952747  hitchhiker  0.0000360916 
 
 
-
 
NC_011761  AFE_0304  hypothetical protein  32.39 
 
 
117 aa  40.4  0.008  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
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