Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1083 |
Symbol | |
ID | 2688626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1168841 |
End bp | 1169917 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637125752 |
Product | hypothetical protein |
Protein accession | NP_952136 |
Protein GI | 39996185 |
COG category | [S] Function unknown |
COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAACGG AGGGCCCCGT GGCGATCAAC AGCATGAATA CGGTATTTCT TGAGGTAGTC GAGTGGTTTG ACGACAGCGG CCGGGAGATG GTGCGCCGCA TCCCCCCCGA GGGGTCCGCC GAGATCAAAT TGGGCGCCCA GCTGGTGGTG CGGGAGAGTC AGCGGGCGGT CTTCTTCAGG GACGGCAAGG CCGCCGACTG CTTTGGCCCC GGTAGGCATA CCCTGACCAG CGCCAACCTG CCGATCCTGA CTAAGCTCCT GTCGCTCCCC TGGGGAGGCA CCTCTCCCTT CCGCTGCGAA GTCTGTTTCG TGGGAATACA GACCTTCACC GACCTGCGCT GGGGAACCAA GGAACCCGTT GCCTTCCGGG ACAGCCGCTT TGGCATGGTA CGGCTGCGGG CCTTCGGCAC CTACACCCTG CGGGTGGTCG ACCCGCAGCT CCTGGTGAAC GCTCTGGTGG GAACCCGGGG GCTTTACACC AGCAGCGAGC TGGAGGAACT GTTCCGCGAC ATCATCGTGG CGCGGCTCAA CGACTACCTG GGCGAAACCA TCGACTCGGT TCTGGATCTG CCCGCCCGCT ACGATGAGAC TTCTGCTGCG CTCAAGGAAC GCCTGGCAGG AGACTTCGGA GGATTCGGCA TCGAACTGGC CGAACTTTAC GTGAACGCGA TCACTCCCCC GCCGGAGGTC CAGAAGGCAA TCGACGAGCG CACCTCCATG GAGGCGGCCG GCGATGTGGA TCGCTACCTG AAGTTCAAGG CGGCCCGAAG CCTGGAAGCG GCGGCCTCGG CCGAGGGGGG CGGCGAGGCT GCCCAGGGGA TGGGGATCGG GGTCGGTGCC GGTCTCGGCA TGATTCTCCC CGGTATGGTG GCGAATGCCA TGGCACAGGG AGCTGATGCG TCCGCTCCTG TCGGCACGGG TAGCTGTCCC CGCTGTATGG CGCCGTTGGT GGCGGGTGGA AATTTTTGCC ATCAGTGCGG CGCCCCGGTA GAGTCCGGCT TTTGCTCCGG CTGCGGCAAG CCGCTGCCGA CAGAAGCTCG CTTCTGCCCC GGCTGCGGAC GGCAGGCCGG AGCATAG
|
Protein sequence | MRTEGPVAIN SMNTVFLEVV EWFDDSGREM VRRIPPEGSA EIKLGAQLVV RESQRAVFFR DGKAADCFGP GRHTLTSANL PILTKLLSLP WGGTSPFRCE VCFVGIQTFT DLRWGTKEPV AFRDSRFGMV RLRAFGTYTL RVVDPQLLVN ALVGTRGLYT SSELEELFRD IIVARLNDYL GETIDSVLDL PARYDETSAA LKERLAGDFG GFGIELAELY VNAITPPPEV QKAIDERTSM EAAGDVDRYL KFKAARSLEA AASAEGGGEA AQGMGIGVGA GLGMILPGMV ANAMAQGADA SAPVGTGSCP RCMAPLVAGG NFCHQCGAPV ESGFCSGCGK PLPTEARFCP GCGRQAGA
|
| |