| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0842 |
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| Symbol | |
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| ID | 2685412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 898971 |
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| End bp | 901334 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637125514 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_951899 |
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| Protein GI | 39995948 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.220519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGC CGTCGGTCTG CGGTGCAATC ATCATGTATT CTCCAAGACA AAACGGTAGG
CCCGGAAAAG ACGATCCCAT GCCCATAACG ATTCCTTCTG TGTTCAAAGC AAGACTGACT
CCCCTGTCGA TCGCGCTCAT CTATGCCCTG GCCGGCGGAG CGTGGATGGT GGTGGCGAAT
GCCCTGATCG GCACCCTATT CGGGGGGCAG CCAGTGGCGG CGTGGCTGAC CGCGTTGAAC
GGGGTGCTTC TGATTGGCGT GTCGGCGGTT CTGCTGTTTC TGCTGGTCCG CCGCAGAGAA
GCGACCATCA TACGCTCGCA GGAGTCGCTG CGGAGAACCA ACCGTGCGCT TGCGACCCTC
AGCGAGTGCG ACCAGGCTCT CCTGCGTGCC GACGACGAGC AGGGGTTCAT CAAGGATGTA
TGCCGGATTG CGGTGGAACA CGGAGGGTAT CGTCAAGCAT GGGCCTGGTT TGCGGAGGCC
GATGGAGTGG CATCGGTGCG GCCGGTGGCG TGCTGGGAAA GTACGGTTAC GGATGCAAAG
TTTCAACTCG ACTCGGACAT GGGACAGGGG ATGGCACGGG AAGCGCTCGC TGCCGGCGTT
CATGTCGTGC GGAACATCAA TGCCAGACAG GGTGCCGGCG AACTCTTCAG GCGCATCACC
TCTTCCGTGC TATCGCTGCC GCTGTCCGAC GACGAAGGGG CCTTCGGCGC CCTCGTCATA
TACGCCGACG GTGCCGACGC CTTTGCCCCG GAAGAGGTCG AGCTCTTGCG GAAGCTGGCC
GGCAACCTCG CGCATGGGAT TACGACGCTC CGGGTTCAGG CCGAGAAATG CCAGCTTGAA
AAACAGCATG CGGTTCTCGC CGCTGTTCTT GACCAGTTCA TGCAGGGGGT TGTCCTTTTT
GCCCCCGACG GGCTGATACG CTACGTCAAT CAGGCATTTG AACGAATCAG CGGGACAGAC
CACGCCGGTA TCATCAATAA GCGCATTCAC AACTACGGCA AATCGCTCTT CGGATCTCCA
TTCATTCAGG CACTGACCGA CGTTGTCGCC CAGGCGAGGA CGCGAACCGG AAGATATGTC
ATCGTACGGG ACGACGGCAG CAATGTGGAT GTCGAGGTAA TTCTTTCCCC GGTCAGGGAG
ACGTCCGGCA CCGTCGCAAG CTATGTTGCC ATTGTCCGTG ACGTGACGCC GGAGATGCAG
CTGGAAAGCC AATTGCGCCA CGCACAGAAA ATGGAAGCCG TGGGGACACT GGCCGGAGGG
ATCGCCCATG ATTTCAACAA TATTCTGGGG GCCATAATTA TCAGTACCGA GTTGGCTCTT
GATGACGCAA AAGAGGGGGC AAGCAACCCG GAGCTGCTTG AAATAGTGCT CAATGCGGCC
GAACGCGGCA GGAACCTGGT CACGCAGATT CTCGCCTTCA GCAGGCAAGG CGAGCAAAAA
CGGCAAACGG TGCGAATAGC CCCGATCGTA AAGGAATGCC TGAAACTGCT GCGGGCTTCC
CTGCCAACAA CCATCGACAT TCGTCCCACC ATCTCCTGCG AAGACGCAAT GGCTTCGATC
GACCCGACCC AGATCCATCA GGTCATCGTG AACCTTTGCA CCAATGCGGC CCATGCGATG
CACGGCAAGG TGGGGATGCT CGAAGTCACC CTGACCGCGG TCACCCTCCA TGATGATATA
ACCGGCACTC ATCCCGACCT GCATGCCGGC CCCTATGTGG AACTTTCGGT CAAAGATACG
GGACACGGCA TGGGAAGCGA GGTTCTGGAG CGTATCTTCG ATCCGTTTTT CACCACGAAG
GAGCAGGGAC GGGGAACAGG ACTGGGTCTG CCCGTTGTCT ATGGTATCGT AAAGGACCAT
GGCGGGGGGA TCGTGGTGGA GAGCGAGCCC GGCAGCGGAA CGACCGTGCG GGTCCTGATT
CCGAGGGCGG AACAGATCGA GGAACAGCCG GAGGCCGCGC CTGACGGTGC ACCCGCCGGG
GGGGACGAGA GGATTCTCTA TGTGGATGAC GAAGAAGACC TGGTCGCCAC CACCGGCGAG
ATGTTACGGC GGCTCGGCTA CGACGTTGTT GCCACCACGG GCAGTGTCGA AGCGCTGAAG
CTGTTCACCG CTCAACCCGG GCTCTTCGAC CTGATTATCA CCGATCAGAC CATGCCCCTG
CTGACCGGAA CGGAACTGAC CCGTGCACTA CGCCGCCTTC GGCCGGATGT GCCGGTTCTG
CTTTGCTCCG GCTTTATCGA CCAGGATGAA CGAACGATCC TTGAACAAGC CCGTTCGGCA
GGCATTGCCG ACGTCCTGCG GAAGCCGGTT GACAGAGACG AAATGGCCCG GGCTGTTCGA
CGGATATTGG ACAGGAGAGT ATAA
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| Protein sequence | MNPPSVCGAI IMYSPRQNGR PGKDDPMPIT IPSVFKARLT PLSIALIYAL AGGAWMVVAN
ALIGTLFGGQ PVAAWLTALN GVLLIGVSAV LLFLLVRRRE ATIIRSQESL RRTNRALATL
SECDQALLRA DDEQGFIKDV CRIAVEHGGY RQAWAWFAEA DGVASVRPVA CWESTVTDAK
FQLDSDMGQG MAREALAAGV HVVRNINARQ GAGELFRRIT SSVLSLPLSD DEGAFGALVI
YADGADAFAP EEVELLRKLA GNLAHGITTL RVQAEKCQLE KQHAVLAAVL DQFMQGVVLF
APDGLIRYVN QAFERISGTD HAGIINKRIH NYGKSLFGSP FIQALTDVVA QARTRTGRYV
IVRDDGSNVD VEVILSPVRE TSGTVASYVA IVRDVTPEMQ LESQLRHAQK MEAVGTLAGG
IAHDFNNILG AIIISTELAL DDAKEGASNP ELLEIVLNAA ERGRNLVTQI LAFSRQGEQK
RQTVRIAPIV KECLKLLRAS LPTTIDIRPT ISCEDAMASI DPTQIHQVIV NLCTNAAHAM
HGKVGMLEVT LTAVTLHDDI TGTHPDLHAG PYVELSVKDT GHGMGSEVLE RIFDPFFTTK
EQGRGTGLGL PVVYGIVKDH GGGIVVESEP GSGTTVRVLI PRAEQIEEQP EAAPDGAPAG
GDERILYVDD EEDLVATTGE MLRRLGYDVV ATTGSVEALK LFTAQPGLFD LIITDQTMPL
LTGTELTRAL RRLRPDVPVL LCSGFIDQDE RTILEQARSA GIADVLRKPV DRDEMARAVR
RILDRRV
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