| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2146 |
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| Symbol | aksA |
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| ID | 8137482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2504905 |
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| End bp | 2506053 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644869761 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_003021956 |
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| Protein GI | 253700767 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGGAT TTCCCAAGGC CCAGGTTTTC ATCGCAGACA CCACGCTGCG AGACGGCGAA
CAGACGGCGG GGGTGGTCTT CACAGCGAAG GAAAAAATCT CCATCGCGAG GCAGTTGGAC
GCCATGGGGG TCCACGAACT GGAATGCGGG ATTCCCGCCA TGGGCGAGGA GGAGCGCGAC
TCGATCCGGG CACTTGTGGC GTTGGGCCTT TCGGCCCGGC TCGTCACCTG GAACCGCGCG
CTGGTGTCGG ACATCGAGGC GAGCATCGCC TGCGGCATCA AGGCCGTGGA CATCTCGCTC
TGCGTCTCGG ACATCATGAT CGAACACAAG ATCAATAAGA GCAGGGCATT TGTGAAGGAA
CAGCTGAAGC GGGCGCTATG CTTCGCCAAG GATAAGGGGC TCTACGTCTG CGTCGGGGGC
GAGGACGCCA GCCGCGCCGA CGGCGATTTC CTGATCGAGC TGATGCAGAT CGCCCAGGCA
AACGGCGCCG AGCGCTTCCG GTTCTGCGAC ACGCTCGGCA TCCTCGACCC CTTTGCCATG
TTCGAAAAGG TGGGGCGCCT GAGAGCCGCG GTCCCCGGTC TCGACATCGA GGTGCACACC
CACAACGACC TCGGGCTTGC CACGGCGAAC GCCCTGGCAG GGGTGAGGGG AGGGGCTTCC
TACATCAGCA CCACGGTCAA CGGCCTCGGC GAGCGGGCGG GGAACGCCGC GCTGGAAGAG
GTGGTCATGG CGCTGAAGGT CGCCTGCGGC ATCGATGCCG GCATCGACAC CAGGCGTTTT
AAGTCGGTGT CCCGGCTGGT GGGACGCGCC TCCAACCGCG AGGTCCCCCC CTGGAAGGCC
GTCGTGGGAG AGAGGGTCTT CTCGCACGAA TCCGGGCTGC ATGCGGACGG CGTTCTGAAG
GACCCGAGGA ACTACGAGGG GTTCACCCCT GAGGAAGTGG GGCTCAAAAG GCATATCGTC
GCGGGGAAAC ATTCCGGGAC CAACGGGATC GTGGAAAGCT ACCGTCAGAT CGGCATCCCC
ATTTCCAGGG AGGAGGCGCA GGAGCTGATG GACAAGGTGA GGAGCACGGC TCAGCGCATC
AAGGGCGCGC TGGCCCCGGT GGACCTGCTC AAACTGCACC AGGGGAGAGG GGTTTCGCTG
GCTGCTTAG
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| Protein sequence | MAGFPKAQVF IADTTLRDGE QTAGVVFTAK EKISIARQLD AMGVHELECG IPAMGEEERD
SIRALVALGL SARLVTWNRA LVSDIEASIA CGIKAVDISL CVSDIMIEHK INKSRAFVKE
QLKRALCFAK DKGLYVCVGG EDASRADGDF LIELMQIAQA NGAERFRFCD TLGILDPFAM
FEKVGRLRAA VPGLDIEVHT HNDLGLATAN ALAGVRGGAS YISTTVNGLG ERAGNAALEE
VVMALKVACG IDAGIDTRRF KSVSRLVGRA SNREVPPWKA VVGERVFSHE SGLHADGVLK
DPRNYEGFTP EEVGLKRHIV AGKHSGTNGI VESYRQIGIP ISREEAQELM DKVRSTAQRI
KGALAPVDLL KLHQGRGVSL AA
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