Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1843 |
Symbol | |
ID | 8137174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2144941 |
End bp | 2145501 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644869454 |
Product | Peptidase M23 |
Protein accession | YP_003021654 |
Protein GI | 253700465 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.000204635 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGGGTTT TGCCAATAGC CGCATTCGTT CTTTTCACTT TTCCCGCCGT CGCCCTGGCC GACCTCGCCC TCCCCGTGAA CGGGGTTGTG ACCTCCGGAG TAGGGTGGCG GGTCGACCCC TTTGGCAGCG GCAAGCTCGC CTTTCATCGC GGCATCGATA TCGCAGTCCC CGTTGGCACC CCGGTCCGGG CTACCCGCAG GGGAAGGGTC GTGTTCGCAG GGGAACGTCG CGGTTTAGGC GCCACCGTCA TCGTCGAGCA CGGCAACGGC GACAGAACCC TCTATGGGCA TAATGCCTCG GTAAAGGTGA GCGCCGGCGA GCAGGTGAAA GCTGGCGACG TATTGTCGTA TTCTGGAAAC ACAGGGAGAT CCACCGGTCC TCATGTGCAT TACGAGCTGC TGGCGAGCGG GCGGCCGGCA GTAGAAGAAG TCGCAGCGTT CGAGGTAGCG GAAAAAACTC AGGTCCCAAG CGGCAATCAG CGTCGAGTGC TGGAACAAAA GATGGAAGAG TCCCTTGAGT CGCTTCTCAC GACAATCAGG TCGGACCTCT CGGGCGGTTG A
|
Protein sequence | MRVLPIAAFV LFTFPAVALA DLALPVNGVV TSGVGWRVDP FGSGKLAFHR GIDIAVPVGT PVRATRRGRV VFAGERRGLG ATVIVEHGNG DRTLYGHNAS VKVSAGEQVK AGDVLSYSGN TGRSTGPHVH YELLASGRPA VEEVAAFEVA EKTQVPSGNQ RRVLEQKMEE SLESLLTTIR SDLSGG
|
| |