15 homologs were found in PanDaTox collection
for query gene GM21_1281 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1281  anti-sigma-factor antagonist  100 
 
 
116 aa  234  4e-61  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00946489 
 
 
-
 
NC_011146  Gbem_2941  Sulfate transporter/antisigma-factor antagonist STAS  83.62 
 
 
116 aa  199  9.999999999999999e-51  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2429  anti-sigma-factor antagonist domain-containing protein  47.87 
 
 
120 aa  89.4  1e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.0188402  normal 
 
 
-
 
NC_009483  Gura_2995  Sulfate transporter/antisigma-factor antagonist STAS  40.62 
 
 
120 aa  81.6  0.000000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2621  sulfate transporter/antisigma-factor antagonist STAS  37.5 
 
 
120 aa  79.3  0.00000000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1592  sulfate transporter/antisigma-factor antagonist STAS  35.58 
 
 
120 aa  65.1  0.0000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2712  hypothetical protein  30.93 
 
 
130 aa  62.4  0.000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0632  anti-sigma-factor antagonist  31.63 
 
 
105 aa  57.4  0.00000006  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1605  anti-sigma-factor antagonist domain-containing protein  28.89 
 
 
115 aa  52.8  0.000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.573914  n/a   
 
 
-
 
NC_010814  Glov_1740  sulfate transporter/antisigma-factor antagonist STAS  27.84 
 
 
118 aa  52.8  0.000002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000969035  n/a   
 
 
-
 
NC_011769  DvMF_0237  putative CheA signal transduction histidine kinase  35 
 
 
669 aa  50.1  0.00001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0874018 
 
 
-
 
NC_007954  Sden_3295  Sulfate transporter/antisigma-factor antagonist STAS  40.32 
 
 
104 aa  48.9  0.00002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0914  STAS domain protein  35.21 
 
 
96 aa  44.3  0.0005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1645  putative CheA signal transduction histidine kinases  33.33 
 
 
731 aa  44.7  0.0005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.954739 
 
 
-
 
NC_007005  Psyr_0787  Sulfate transporter/antisigma-factor antagonist STAS  36.36 
 
 
96 aa  41.6  0.003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
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