| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6988 |
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| Symbol | |
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| ID | 5675299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8509551 |
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| End bp | 8511170 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245834 |
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| Product | lysozyme |
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| Protein accession | YP_001511225 |
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| Protein GI | 158318717 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.14763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCTT TGCGAGGTCG GCACCGACGC CGTCGTCGTC AGATCATTTC GGGTACCGCG
GCCCTGCTCA CCGTTGGCGG TGCGGTCGGC CTGGCCGTGG TGGTGCCCGG CACCGCGGAC
GCCGCCGGCC TCGACGCCGC GTACAGCCGC ACCAACGACT GGGGCACCGG CTACTCCGCC
CAGTATCAGG TCACCAACTC CGCGGACTCG CCGGACGGCT TCACCCTCGA GTTCGACCTG
CCGGACGGTG CGACCCTCAC CTCGCTGTGG AACGCCGCCT ACCAGGTGGA CGGCCGTCAC
GTGACCGTCA CCCCGCCGGC CTGGCAGACC ACACTCGCGC CACGGGAATC GGTCGACGTC
GGCTTCGTCA TCGCCGCTCC GGGCGGCGCC ACCGACCCCC TCGGATGTCG GATCAACGGC
GAGGACTGCA CGCCCGGCTC CGGCAACGGC GACCCGGGCC CGGAGCCTGA ACCCTCGGCC
ACCGGGCCGG CCGCACCGTC GTCCCCGCCG CCGAACGCGT CGCCGACCGA CCCGGCCACG
CCACCCGACA CGGCGCCGCG GCCCACCGCG GGCCCGGGCA CCGGCCAGCC GAGCGGCGCT
CCGACGAGCA CCCCGAGCAC GCCGACCACG CCGCCCGCTT CGACCACCGC GCCGCCGGCA
CCGCCGGCAC CACCGGCACC GCCGTCGAAC GGCTCCAGCG GATCGGGCGG GTTCGCGCCG
TACGTCGACA CCTCGCTGTA CCCGCCGTTC GACCTGGTCG CGGCGGCGCG GACCGCCGGC
CTGCGTGACG TCACGCTGGC CTTCGTCGTG GCCGGTGGAG GCGGCTGTAC GCCGAAGTGG
GGCGGGGTCA GCGACCTCAC CATGGACGGC GTGCCCGGCC AGATCGGCCG GTTCCGTGAG
CTGGGCGGCG ACGTCCGGGT GTCGTTCGGC GGGGCGTCCG GAACCGAGCT CGCCAGTGCC
TGCGGCAGCG CGGGCGACCT GGCGGCCGCG TACCGCAAGG TGGTCGACGT CTACGGGGTG
ACCCGGCTCG ACTTCGACGT CGAGGGCGGC ACGTTGCCGG ACGTCGCCGC GAACACCCGG
CGTGCCCAGG CGATCGCCCG GCTTCAGCGG GAGGCCGCGG CCGGAGGCCG GCCACTGGAG
GTCTCGTTCA CGCTGCCGGT GCTGCCGTCC GGCCTGACCC AGGCCGGCGT GGACCTGCTG
GCCAACGCCC GGGAGAACGG CGTGACGGTG AACGCCGTCA ACATCATGGC GATGGACTAC
GGCGACGGCG CCGCGCCGAA CCCGGCGGGC CGGATGGGCC AGTACGCCAT CGACGCCGCC
ACCGCGACCC AGGCCCAGGT CAAGGGCGTG TTCGAGCTGT CCGACGCGCA GGCGTGGGGG
CGGGTGGCCG TCACCCCGAT GATCGGTGTG AACGACGTCG CCAGCGAGGT GTTCACCCTG
GCCGACGCGC GGCGGCTGGT GCGGTTCGCG TCCGAGGTCG ACCTCGCCTG GCTGTCGATG
TGGTCGCTGA CCCGCGACCA GCCCTGCCCC GGTGGGCCGG TGCCGTACGC GCAGCCGACC
TGCGGCGGCA TCGAGGCGCA GCCGTTCGAT TTCACCCGCG CCTTCAACGC CGCCCAGTGA
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| Protein sequence | MSPLRGRHRR RRRQIISGTA ALLTVGGAVG LAVVVPGTAD AAGLDAAYSR TNDWGTGYSA
QYQVTNSADS PDGFTLEFDL PDGATLTSLW NAAYQVDGRH VTVTPPAWQT TLAPRESVDV
GFVIAAPGGA TDPLGCRING EDCTPGSGNG DPGPEPEPSA TGPAAPSSPP PNASPTDPAT
PPDTAPRPTA GPGTGQPSGA PTSTPSTPTT PPASTTAPPA PPAPPAPPSN GSSGSGGFAP
YVDTSLYPPF DLVAAARTAG LRDVTLAFVV AGGGGCTPKW GGVSDLTMDG VPGQIGRFRE
LGGDVRVSFG GASGTELASA CGSAGDLAAA YRKVVDVYGV TRLDFDVEGG TLPDVAANTR
RAQAIARLQR EAAAGGRPLE VSFTLPVLPS GLTQAGVDLL ANARENGVTV NAVNIMAMDY
GDGAAPNPAG RMGQYAIDAA TATQAQVKGV FELSDAQAWG RVAVTPMIGV NDVASEVFTL
ADARRLVRFA SEVDLAWLSM WSLTRDQPCP GGPVPYAQPT CGGIEAQPFD FTRAFNAAQ
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