Gene Franean1_6971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6971 
Symbol 
ID5675283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8497095 
End bp8497526 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content74% 
IMG OID641245819 
Producthypothetical protein 
Protein accessionYP_001511210 
Protein GI158318702 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC TTCCGCTGGA TGTGGCCCGG CAGATCGTCG CCGCGGCCCG GGCCGCGGGG 
CGCGAGCACG GTCTCAAGCC GCTCACGGTG GTCGTGCTGG ACGCCGGCGG CCACGTGGTC
GCTGTCGAGC GGGAGGATGG CGCGTCGACG AAGCGGTTCG AGATCGCCTT CGGCAAGGCG
CACGGTGCGG TGGCCTTCGG CCTCGGCAGC CGGGCGCTCA TGGCACGCGC CGAACAGCAG
CCGTACTTCA TCGCGGCCGC GACGTCCGCC ATCGGCGGCG CCCTGGTGCC GGTGCCGGGC
GGGGTGCTCG TGCGTTCCGC CGACGGCGAG CTGGTGGGCG CGGTCGGCGT CTCCGGCGAC
ACGTCGGACA ACGACGAGCT GGCTGCCGTC GCCGGCATTG AGGCGGTCGG GCTCAGCCCG
CAGACCGCCT GA
 
Protein sequence
MTALPLDVAR QIVAAARAAG REHGLKPLTV VVLDAGGHVV AVEREDGAST KRFEIAFGKA 
HGAVAFGLGS RALMARAEQQ PYFIAAATSA IGGALVPVPG GVLVRSADGE LVGAVGVSGD
TSDNDELAAV AGIEAVGLSP QTA