| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6763 |
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| Symbol | |
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| ID | 5675076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8227380 |
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| End bp | 8228030 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641245612 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001511003 |
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| Protein GI | 158318495 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGATCA GGTCGGTGTT CTTCGACGTA GGCGAGACGA TCGTGGATGA GTCCCGGGAG
TACGGGACGT GGGCGGACTG GCTGGGGGTG CCTCGGCACA CGTTCTCCGC GGTGTTCGGC
GCTGTGATTG CCCGTGGGCT GGACTACCGG GAGGTATTCG AGGTGTTCCG GGCCGGATTT
GACCTCGGGG TGGAGCGCGA GCGGCGCGCG GCGGCCGGGC AACCGGAGTC CTTCGGCGAG
GAGGACCTGT ACGCCGATGC CCGGCCCTGC CTGGCGGCGT TGCGCGCCGA GGGTCTGCGG
GTCGGCCTGG CGGGCAACCA GACCGCCCGC GCCGAAGTCA TCCTGCGGGC GTTGGATCTC
CCCGTTGACG TGATCGGAAC GTCGGGCGGC TGGGGTGTGG AGAAGCCCTC GGTGGAGTTC
TTCGAGCGTG TCGTCGCCGA AGCGGGTTGC CCGGCTCGGG AGGTGCTGTA CGTCGGTGAT
CGGATCGACA ACGACATCCG TCCCGCGCAG GCTGCCGGCG TGGCGACTGC CCTCATCCGT
CGGGGTCCGT GGGGTTACAT TCTTGAGGAT CCCGCAGTCG AGGATCACTG TCTGTTTCAC
CTCGACTCGT TGACTGAGCC ATTCCCAGCA ACGGCCCGTG ACGTTCGGTG A
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| Protein sequence | MPIRSVFFDV GETIVDESRE YGTWADWLGV PRHTFSAVFG AVIARGLDYR EVFEVFRAGF
DLGVERERRA AAGQPESFGE EDLYADARPC LAALRAEGLR VGLAGNQTAR AEVILRALDL
PVDVIGTSGG WGVEKPSVEF FERVVAEAGC PAREVLYVGD RIDNDIRPAQ AAGVATALIR
RGPWGYILED PAVEDHCLFH LDSLTEPFPA TARDVR
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