Gene Franean1_6325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6325 
Symbol 
ID5674644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7681761 
End bp7682972 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID641245178 
Producthypothetical protein 
Protein accessionYP_001510573 
Protein GI158318065 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.305275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCGA CGGACCCGTG GCATGGGGGA TCTGACCATG AGCGACCCGG TGCCGCGGGG 
ACGCACGTGG GTGACGGTTC TCTTTTCCGG CGGAGCCCTG ACGTCGCGGT CATCGGCGTG
GGGCCGGGCC ATACGATCCT ACGACTGACC CAGCGGAACC AGGCCGCTGC CATCCGTTCG
CCGTCGATCT GGACGCTCGA CCTCCTCGCG CATTTCGGGC AACCTCGGAC GCCGTCGTCC
TGGCTGACAC GCTGGCCGGC GGAACAGCAG AACGCGGCGA CGGGGGTGTT CGCCCGTGCG
CTGACGCGGG GGCTGCTGGT CACGGCAGAC CCCGGCACCG GCACCGGCGA CAGCGACAGC
GACAGCGACA GCGACGACAC GGACGACGGC ACCGACGAGA TGGTGCGAAC CCTGTTCGTG
GAGCTCGACC GCCTGCGCTC GCAGCTGCGT TCGGCGGACG GCCCTGTCCT CTCGGAGCTG
CTCGGAAGCG ACCAGGCCCT TCCCCGGCTG GTTCTGCACA CCTCCCATCT CCTGGTCAGG
GACGTGGCGG ACCGGCTGGA GGCCGGAACG CGGGCGCGGC TACGGAGGCG CGCGAGCGAG
ATCGTGCCGT CGGGTGTGCC GCTGCGGCTG CATCTCGGCT GTGGGCCGCA CCGGCTGCCC
GGGTGGGTGA ACGTCGACCT GCGTGATCCC GCCGCGGATC TTCGGTTGGA TGTCCGCGCC
GGACTGCCCT TCGACGACGG GGCCGTGACC GCGGTCTACC TGGCCCACAT TCTGGAGCAT
GTCGAATACC CGGACGAGGC CCTGCGGGTG CTGCGGGAGT GCTGGCGAGC CCTGGGCGAC
GGCGGGCTGC TGCGGGTGGC TGTTCCCGAT CTGCGTTCCT TCCTCGATGC CTACGCCGCG
GGCGACGACG GTTTCTTCGA GTACTTCGAG CGGCGGTGGG AACGCGTGCC CGCACCGACC
CCGCTCGCGT CGTTTCTGCA CCACGCGGGG GCCGGGGAGT TCCCGTGGGT GGCCGACCGG
CACAGGTTCG GCTACGACGA GCGGACCCTC GGGGAGCTCC TGCGGGAGGC CGGGTTCACC
GACGTCCGGC GTTGCTCTGC CGGCGACAGC AGCCTTGCGG ATCCGAACCT CGACTACTCC
TGGGCCAACG GGGCGGCCGT GCGCGGACGG CCGTTGTCGC TGATCATGGA AGCGAAGGTG
GTGCGGCAGT GA
 
Protein sequence
MPPTDPWHGG SDHERPGAAG THVGDGSLFR RSPDVAVIGV GPGHTILRLT QRNQAAAIRS 
PSIWTLDLLA HFGQPRTPSS WLTRWPAEQQ NAATGVFARA LTRGLLVTAD PGTGTGDSDS
DSDSDDTDDG TDEMVRTLFV ELDRLRSQLR SADGPVLSEL LGSDQALPRL VLHTSHLLVR
DVADRLEAGT RARLRRRASE IVPSGVPLRL HLGCGPHRLP GWVNVDLRDP AADLRLDVRA
GLPFDDGAVT AVYLAHILEH VEYPDEALRV LRECWRALGD GGLLRVAVPD LRSFLDAYAA
GDDGFFEYFE RRWERVPAPT PLASFLHHAG AGEFPWVADR HRFGYDERTL GELLREAGFT
DVRRCSAGDS SLADPNLDYS WANGAAVRGR PLSLIMEAKV VRQ