Gene Franean1_6122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6122 
Symbol 
ID5674443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7449963 
End bp7450607 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID641244974 
Productphosphoglycerate mutase 
Protein accessionYP_001510372 
Protein GI158317864 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.756023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.910553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGC CGGAGGTCAC GACCGTGCAC CTCGTCCGGC ACGGCGAGGT GTTCAACCCG 
AGCAAGGTGC TCTACGGCCG GCTGCCCGGC TACCGGCTCT CCGAGACCGG CGAGCGGCAG
GCCAAGATCA CCGCCGAGTA CCTGGCCGGC TTCGATGTCG CCGCGGTGGT GGCGAGCCCG
CTGGACCGGG CGCAGCAGAC GGCCACCCCG ATCGCGGCGG CGCACGGCGT GCCGCTGCAG
GTCGACCCGC GGCTGATCGA GAGCCGCAAC GCGTTCGAGG GCAGGACCTT CGAGGCGGGC
CCCGCGGTGT TCCGCTATCC GGCGATGTGG AAGCTGCTGC GCAACCCGCT GACACCGTCC
TGGGGCGAGC CGTACACGGA GATCGCCGGG CGCATGCTCG GCAGCGTCGC CGAGTGGCGG
GACGCCCATC GGGGCCGGCA CGTCGTCCTG GTCAGCCACC AGCTTCCGGT GTGGATCGCC
CGGCGCGCGC TGGAGGAGCA GCACCTGTGG CACCGCCCGG ACCGGCGGCA GTGCGCGTTG
GCGAGCGTCA CCTCGGCCGT CTACGTGTCC GGGGAGCTCC TCCGGGTGGA GTACAGCGAG
CCCAACGGGC CCACCGCCAA CGCGCCCGGC TCCGTCGGCG CGTGA
 
Protein sequence
MSGPEVTTVH LVRHGEVFNP SKVLYGRLPG YRLSETGERQ AKITAEYLAG FDVAAVVASP 
LDRAQQTATP IAAAHGVPLQ VDPRLIESRN AFEGRTFEAG PAVFRYPAMW KLLRNPLTPS
WGEPYTEIAG RMLGSVAEWR DAHRGRHVVL VSHQLPVWIA RRALEEQHLW HRPDRRQCAL
ASVTSAVYVS GELLRVEYSE PNGPTANAPG SVGA