Gene Franean1_6120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6120 
Symbol 
ID5674441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7448143 
End bp7448772 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content72% 
IMG OID641244972 
Productredoxin domain-containing protein 
Protein accessionYP_001510370 
Protein GI158317862 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.16555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.593362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACG ATGCCGAAAG GAGCGGGCTC ATCCTGGGCT GGGAGCGGGA CACTGGGCGG 
AAACGCCGCG TGATGGCCGT GGTCGCCGCC GTGCTGCTGG TCGGCGGCGG GCTCGCGGCC
TGCTCGGCGA ACGCGAGCAA GGTCGACGCC ACGGGTGGCG GGGGCTATGG ATTCGTTCAA
CAGGCACCCG GGCAGGACTT CGTGCCCGCC GCGGACCGCC GTGAACCGCC GGGGATGTCC
GGCGCGACGC TCGACGGGAG CCAGCTCGAC CTCGCCTCGC TGCGCGGCAA GCCCGTCGTG
GTGAACTTCT GGGCCTCTTG GTGTGCCCCG TGCCGGGCGG AGACCCCCGG TCTCGTCACA
CTCGCCGGCA GGAATTCGGA CGTCGCCTTC GTCGGGGTGA ACGAGAAGGA CAACGCCTCC
AGCGCGAAGG CGTTCACCCG CGACTTCAAG GTCGGATACC CGAGCATCGT CGACCGGCTC
GGCACGCTCG CCGCCGGTTG GCCGGTCGCC CCGGGCCTGC CGTCGACGTT CGTCCTCGAC
GCGGACGGCC GCATCGCCGC CCGCTTCACC GGTGGCGTGC TGCCGGCGGA GCTGACCACC
GTGCTCGAGC GGCTCCGGAC GGAGGTCTAG
 
Protein sequence
MLDDAERSGL ILGWERDTGR KRRVMAVVAA VLLVGGGLAA CSANASKVDA TGGGGYGFVQ 
QAPGQDFVPA ADRREPPGMS GATLDGSQLD LASLRGKPVV VNFWASWCAP CRAETPGLVT
LAGRNSDVAF VGVNEKDNAS SAKAFTRDFK VGYPSIVDRL GTLAAGWPVA PGLPSTFVLD
ADGRIAARFT GGVLPAELTT VLERLRTEV