| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6012 |
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| Symbol | |
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| ID | 5674333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7332346 |
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| End bp | 7333881 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641244860 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001510262 |
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| Protein GI | 158317754 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0524001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.189514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAG CACATACTGT TGCCGAGGTC CGGGACGCCG AGGCGCCCCT GCTCGCGTCC
CTGCCCTCCG GCGGGCTCAT GCAGCGCGCC GTGTCCGGTC TCGTCTCGCA CGCGGTCCGC
CGCGTCGACC GGGTGTACGG CGCCCGGATC GTCGTCCTCG CCGGTTCCGG TGACAACGGC
GGTGACGCGC TGTGGGCCGG TGCCCGGCTG GCAGCTCGCG GCGCCCGCGT CCACGCCCTC
GCTCCCGGCC GGACCCATCC CGAGGGCACG GCCGCCCTCC TCGCGGCCGG CGGGCGGCTG
CACCGCACCG GCCCGGTCGA CCCGCCCGCA CCGGAGGGGA TGGGCGCCGA CGCGGCCGCC
GACCTCCTCG ACTCCGCCGA CCTCGTCCTG GACGGGCTGC TCGGCATCGG CGGCCGCGGC
GAGCTGCGCG AGCCGTACGC CCAGCTCACC ACGCTCGCGC CGGCCCGGCG GACGGTGGCC
GTGGACGTGC CCAGCGGGGT CGACGCGGAC ACCGGCGCGG TGGCGGAGGG GGCCGTGCGC
GCGGCCGGCA CCGTCACCTT CGGCACGTAC AAGCGCGGCC TGCTGGTCGG ACCCGGAGCT
GTCCATGCCG GGCGGGTCGA GCTGGTCGAC ATCGGGCTGA CCCTGCCCGA GCCCGACCTA
CGTGCCCTGC AGGACGTCGA CGTGGCCCGG CTGTTGCCCG TCCCGGTCGC GGCCGACTCG
AAGTACTCCC GCGGCGTGCT CGGGCTCGTC GGCGGCAGCG ACCGGTACCC GGGAGCCGCG
GTGCTGGCGG TCGGCGGCGC GCTGCGCGGC GGCGCGGGCT ACCTGCGGGT GGTCGCCGAG
GCCGGCGCCG CCGAGTACGT CCGCCGGGCC CACCCGGAAT CCGTGCTGAC GGTGATCGAG
GCGGGGGACG CGGAGGCGAT GCTCGGGGTG GGCCGGGTCC AGGCGTGGGC GATCGGCCCC
GGCCTCGTAC CGGACGAGGC CACCCGGCGC CTCGTCGACG CGCTGCTCGA GCAGACCGAG
AGCGGCCTGC TCGTGGACGC CGGCGCGCTG GACACACTCG CGGCCGCCGT CGCCGCCCGC
CCGGCGGTGC TGCGGGACCG CGCGGGCGCC GTCGTCCTGA CCCCGCACGA GGGCGAGTTC
ATCCGGCTGA CCGGCACGGC ACTCGGCTGG GACCAGGCCG GCACACCTGA GCGCCTGCGG
GCCGACCGTC TCGGCACCGT CCGCCAGGCG GCGCGGGACC TCGGCGCCGT CATCCTGCTG
AAGGGCAACC GGACGATCAT CGCCGCCCCC GGCGGGGAGG CCCTCGTCAA CCTCACCGGG
ACGCCATGGC TGGGAACGGC CGGATCCGGT GACGTTCTCA CCGGACTCGC CGGTTCCCTG
CTGGCCGCGG GCCTGCCGGC GCCGCACGCG GCCGCCGTGG GCGCGTTCCT GCATGGCCGG
GCGGGGGAGC GCGGGCCCGT GCCGCTCGCC GCCGCAGACC TGCCCGCGCT CCTGCCCGGG
GTCGTCGAGG ACCTGCTTGC TAGCGTCGAG GGGTGA
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| Protein sequence | MLEAHTVAEV RDAEAPLLAS LPSGGLMQRA VSGLVSHAVR RVDRVYGARI VVLAGSGDNG
GDALWAGARL AARGARVHAL APGRTHPEGT AALLAAGGRL HRTGPVDPPA PEGMGADAAA
DLLDSADLVL DGLLGIGGRG ELREPYAQLT TLAPARRTVA VDVPSGVDAD TGAVAEGAVR
AAGTVTFGTY KRGLLVGPGA VHAGRVELVD IGLTLPEPDL RALQDVDVAR LLPVPVAADS
KYSRGVLGLV GGSDRYPGAA VLAVGGALRG GAGYLRVVAE AGAAEYVRRA HPESVLTVIE
AGDAEAMLGV GRVQAWAIGP GLVPDEATRR LVDALLEQTE SGLLVDAGAL DTLAAAVAAR
PAVLRDRAGA VVLTPHEGEF IRLTGTALGW DQAGTPERLR ADRLGTVRQA ARDLGAVILL
KGNRTIIAAP GGEALVNLTG TPWLGTAGSG DVLTGLAGSL LAAGLPAPHA AAVGAFLHGR
AGERGPVPLA AADLPALLPG VVEDLLASVE G
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