| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5897 |
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| Symbol | |
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| ID | 5674218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7161416 |
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| End bp | 7163059 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244745 |
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| Product | hypothetical protein |
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| Protein accession | YP_001510147 |
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| Protein GI | 158317639 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0016856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.41818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCT CATCGGGCCC GCCGCCCGTC CTGGGCACGC CACCCTCCCA GGCCGGGCCG
GCGGCGGGAA ACCTACCGCT ACAGCCCGAC CCTGCCCAGC CTGATCGTCA CAATTCGCGA
CCTCATCGTG AGGATCGGTG GCGCGCGGAT CGGCCGTCCG CCGCGCCGCG CCGCTGGGGC
TTCGTGCGGC GCCATGCCGC CTTCCTGATC CTGCTCACGC TGGCCGTCGG GGCCCGGGCC
GCCGTCCTGC TGGCCTATCG GCCCGCGCTC TTCTACTACG GCGACTCGCC CGCCTACCTC
GACCAGGCCA CCAACCGGCT GTGGGCGGGC GACTGGCGGC CGTCGGGCTA CCCGATGTTC
CTGCGGGTCA TCGGCGCCCC CGACCACCTG ACCCGGCTGG TGGTCGTGCA GCACACGGCG
GCCCTGCTGG CCGGGGTCGC CCTCTACGCG GCGTCGCGTC AGCTGTTCGA GCGGCACGGT
CCCGTCGCGG CGGCCGGCCG CACCGGGGGC TGGCCGGCCG CGGTGGTCGC GGCGCCGGCG
CTGCTGGCCC CCTGGGTGCT CGACCTCGGC CAGTTCGTCC TGGCCGACAG CCTGTTCGGG
ACGCTCGTCC TCGGCGGGCT CGTGCTGCTG GCCTGGCCCG GGCGGCCGGC CGCGTGGCGC
TTCGCCGTCG CCGGGCTGCT GCTCGGCGCC AGCCTCACCG TCCGCACGGT CGGCTACGGC
CCGCTCGCGG TGGGCGCGGC CGGTGCCGTC GTCCTGGCTG TCACGCACTG GCGGCGGGCC
CACGCGGCGG TCGTGGCGGC GGGGGCCGTG CTCGCGTTCG TCCTGGGAGC GGCCGTCCCG
GTCGTCGCGT ACTCGGCGTG GAGCGCGGGG CAGGGGAAGG GCTTCACCGT CACCGCGCAC
TCGGGGTTCT TCCTGTACGG CCGGGTCGCC CCGTTCGCCG ACTGCGCCCG CCTGCCCGAC
GATCCCGACC TGCTGTCGCT GTGCGACCCG CGCCCGGTCG GCGAGCACGG CTCCCCGGTG
ACCTACCTCT GGCCGGACGA CTCGCCGCTG CGCCAGGGCA ACGACCTGGT CCCACCGGGC
CGCGAGGAGC TCGCCGGCGA GTTCGCCCGG CACGTGATCC GTGAGCAGCC CTGGACGATG
GTCACCTCGA CCGCCCGCTA CCTGGCCGGG TACTTCTCGC CCGTCCCGTA CGAGAACAGG
CTCACGAGCC GCGCCGACAC CTGGGAGCTG CCCCGGACGG GCACCAACCG CCTCGTCTCG
GACGGCCCGC ACGCCGCCGA CGGGTACTTC TCCGTCGCGC GGCTGAACGA CCCCCCGGTC
GAGCTGCTCG CCTTCTATTC CCGGCTCGGC TACGGGCCGA TGCCCCTGGT CGGCCTGGGT
CTGCTCGCCG GGCTGCTGGC TCAGATCGTC GGGCGGGTGC GCGGGCGCGC CGGCCCCGGT
CGGCTGTTCT GGCTGCTCGG GGGAGCAAGC CTGTCCACCC TGCTCCTGAG CTCCCTGACC
TCGGCGTTCG ATTACCGCTA CCTGGGATCG GTCGTCGGCC TGCTCGCCCC GGCCGCGCTG
CTCGGCGCGG CCGGGCTGGC ACGGGTGCTT CGACCGCGGC CGGTCGGCCG CGGCGGGAGC
GTCAACGAGG GAGGTATCGC GTGA
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| Protein sequence | MASSSGPPPV LGTPPSQAGP AAGNLPLQPD PAQPDRHNSR PHREDRWRAD RPSAAPRRWG
FVRRHAAFLI LLTLAVGARA AVLLAYRPAL FYYGDSPAYL DQATNRLWAG DWRPSGYPMF
LRVIGAPDHL TRLVVVQHTA ALLAGVALYA ASRQLFERHG PVAAAGRTGG WPAAVVAAPA
LLAPWVLDLG QFVLADSLFG TLVLGGLVLL AWPGRPAAWR FAVAGLLLGA SLTVRTVGYG
PLAVGAAGAV VLAVTHWRRA HAAVVAAGAV LAFVLGAAVP VVAYSAWSAG QGKGFTVTAH
SGFFLYGRVA PFADCARLPD DPDLLSLCDP RPVGEHGSPV TYLWPDDSPL RQGNDLVPPG
REELAGEFAR HVIREQPWTM VTSTARYLAG YFSPVPYENR LTSRADTWEL PRTGTNRLVS
DGPHAADGYF SVARLNDPPV ELLAFYSRLG YGPMPLVGLG LLAGLLAQIV GRVRGRAGPG
RLFWLLGGAS LSTLLLSSLT SAFDYRYLGS VVGLLAPAAL LGAAGLARVL RPRPVGRGGS
VNEGGIA
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