Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5842 |
Symbol | |
ID | 5674165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7087296 |
End bp | 7088366 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641244692 |
Product | phosphoribosyltransferase |
Protein accession | YP_001510094 |
Protein GI | 158317586 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0237532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.254841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGCGT GGCCGGTGCG GCGCAGCGGG CAGTTCATGG CCCCGTGCCG GGTTCTGCTC TGGCCGGGTC CGGCCCGCGT CGTCCACAGC CGCCGCGTGC GGTGCTGTCT GTCCACAACT CGGGTCCGGC GATGGCGAAG CCGGTCGATC ACCGGTCATT CTCGTCCGGT GACCCGTTTT CCCCACCTCG CCGAGGCCCT GACGATCCTC GCGGATCTCG TGCTGCCGCG CACCTGCGCG GGCTGCGGCC GGCCCGGTGA GGCCGCCTGT GCGCGTTGCG CGGCGGCCCT GGCGGGTCCC CCAGTTCTCG CCGCTCCGGG TCCCACGGCC AGCCCGGGGC GGCGAGGCCA CCATCCAGCC AGCCACTCCC AGTGGCCCGG CCGGCCACGT GGTCCCTCGT TACAGCCGGC GCTCCGGCCG GCGATGCCCC CCGCCTTCGC GGCGGCCTCG TACGCCGGTG CCGCCCGGGT CCTTCTGCTC TCCTATAAGG AGCGTGGGCG GGTCGACCTC GCTCCCGTGC TGGGCCAGGC GCTCGCGCGG GCGGTGGCGG TCGCGCTGGT GGCGGTCGCA CCCGGCGGTA GCCGGCCCCC ACCGGTGCTC CTCGTCCCGG TCCCGACGAC GGCCGCGGCG CGGCGGCGCC GAGGGGTCGA CCACGTCGCC CGGCTCGCGG CGGTCGCCGC CCGGTCCCTC GCCCACCGCG GGCTCCGGGC GCGGGTAAGC GCGGCGCTGC GGGTGTCGCG GCCCGGAGCC GACCAGGCCG GCCTCGGGGC GGCGGCACGG TCACGCAACC GTTCGGGGGC GTTCGCGCTG CGCACCGGCG TGCCTTCGCC GCGTCCCGGG GAGATCACGG TCGTCGTGGA CGACATCGTC ACCACCGGTG CGACTGTCCG GGAGGCGGTG CGCGCGCTGC GCGCGGGCGG CTGGGCGCCG GCGGCCGGCG CGGCGGTGGC CGCCACACCG CTCCAGCACG GGCGCGACGC GCCATCCTTC GGGATTGCCC GCCGCCCGGG CGGTGGAAGG GGGACACTGG GCGCGAGCGC TCCGCCCCCG GAGCCGACGG CGACAAGCTG A
|
Protein sequence | MPAWPVRRSG QFMAPCRVLL WPGPARVVHS RRVRCCLSTT RVRRWRSRSI TGHSRPVTRF PHLAEALTIL ADLVLPRTCA GCGRPGEAAC ARCAAALAGP PVLAAPGPTA SPGRRGHHPA SHSQWPGRPR GPSLQPALRP AMPPAFAAAS YAGAARVLLL SYKERGRVDL APVLGQALAR AVAVALVAVA PGGSRPPPVL LVPVPTTAAA RRRRGVDHVA RLAAVAARSL AHRGLRARVS AALRVSRPGA DQAGLGAAAR SRNRSGAFAL RTGVPSPRPG EITVVVDDIV TTGATVREAV RALRAGGWAP AAGAAVAATP LQHGRDAPSF GIARRPGGGR GTLGASAPPP EPTATS
|
| |