Gene Franean1_5689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5689 
Symbol 
ID5674015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6907986 
End bp6908750 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID641244542 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001509945 
Protein GI158317437 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC CGGCGTGGCT CGGCGGGACG ATCGGCGTCG TCGGCCTGGT CGCCGTGTGG 
TGGCTGCTCG CCGTGACGCT GCTCGACCGC GGAAGCGTCG TGCCCACGCC CTGGGAGGTC
GTCCACGCCC TGTGGGACGA CCATCGCCTG CTCTGGACGT CCGCCCGGTC GACCGTGTCG
ATCGCGGCCC AGGGCTGGCT CATCGGCAAC GGCCTGGCGA TCGGCCTCGC GGTGCTGTTC
TTCGGCGTCC CCGTCGTCGA GCGGGTGCTG CTCCAGATCG GGGTGGCCTC CTACTGCCTG
CCGATCATCG CGATCGGCCC GATCCTGACC ACGGTCTTCG ACGGCAGCAC GCCGCAGAAG
GCACTGGCCG GGATCTCGGT GTTCTTCACG ACGCTGGTCG GCACCCTGCT CGGCCTGCGC
GCGGCCGACC CGGCCAGCCT CGACGTGATC CGGGCCAGCG GCGGCGGCGT CGTCCACCAG
ATGCGCTACG TCCGGCTGCG CGCCGCCCTG CCGAGCACCT TCGCGGCGCT GCAGATCGCC
GCGCCGGCCG CGATCCTGGG TGCGATCATC GGCGAGTTCC TCGGCGCCGA CCGCGGCCTC
GGGATCGCCA TGGTCAACTC GCAGCAGGCA CTGGAGGTGC CGCGCACCTG GGCGCTGGCC
CTGGTCGCCT CCGCCATCGC CGGTCTCGGC TACGCCCTGA CCGCGCTGCT GGCCCGGCTG
CTGACGCCCT GGGCCCCCCG CGGTAACCCT GGAGGCGCCC GATGA
 
Protein sequence
MTRPAWLGGT IGVVGLVAVW WLLAVTLLDR GSVVPTPWEV VHALWDDHRL LWTSARSTVS 
IAAQGWLIGN GLAIGLAVLF FGVPVVERVL LQIGVASYCL PIIAIGPILT TVFDGSTPQK
ALAGISVFFT TLVGTLLGLR AADPASLDVI RASGGGVVHQ MRYVRLRAAL PSTFAALQIA
APAAILGAII GEFLGADRGL GIAMVNSQQA LEVPRTWALA LVASAIAGLG YALTALLARL
LTPWAPRGNP GGAR