| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5554 |
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| Symbol | |
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| ID | 5673884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6725738 |
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| End bp | 6727390 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244410 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509814 |
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| Protein GI | 158317306 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.715262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCC GGGCAGCCGG GATTCAGAGC CCTGGTGCCG GGCCGGAGGC CGCTTCGGCC
GGCCTGGTCG TTCTTCCCAC ACTGGCGGCG GCGCAGTTCC TCATGACCCT GGACAGCTCG
GTCATGAACG TGTCGATCGC CACCGTGGCC GCGGACATCG GTACCACGGT GACCGGAATT
CAGACCGCCA TCACCTTCTA CACCCTGGTG ATGGCCGCGT TCATGATTAC CGGCGGCAGG
CTGGGGCAGC TCTTCGGGCA TCGGCGTGTG TTCACCATCG GCTGCGTCGT CTACGGCTGT
GGGTCGCTGA CGACGTCCGT CGCCGGGAAT CTCGCCGTGC TCATGTTCGG CTGGTCGTTC
CTCGAAGGAA TCGGCGCCGC GCTGATCATG CCCGCGGTCG TCGCTCTGGT CGCGTCGAAC
TTCGCCTCGG CGCAGCGACC GCGCGCCTAC GGGCTGGTCG CCGCCGCCGG CGCGATCGCG
GTCGCGGCGG GTCCGCTCGT CGGCGGCCTG TTCACCACCT ACCTGTCCTG GCGCTGGGTC
TTCGCAGGCG AGGTCCTCGT GGTGGCCGTC ATCCTGTGGC TGACCCGGGG GATGGCGGAC
ACGCCTCCGA CCGCGCAGGG ACGTCTCGAC ATCGTGGGCA CCGTGCTGTC CGCGGCCGGC
CTGGCGCTGA TCGTGTACGG CGTCCTCCGC TCGGGGAGCT GGGGCCTGGT CCGGCCGGCG
CCCGGCGCGC CCGTCTGGTT GGGGCTCTCA CCCGTGATCT GGCTGGTCCT CGCGGGCGGA
ACCATCCTGT TGCTCTTCGT CCGGTGGCAG GATCACCGGC TGGCCCGCGG CGCCGCCGCG
CTGCTCGATC CGGTGCTGCT GCGGAACCGG ACGTTCCGGG CCGGGCTCAC GTCGTTCTTC
TTCCAGTATC TGCTCCAGGC GGGGCTCTTC TTCGTGGTAC CGCTGTATCT GTCGGTGGCG
CTCGGGCTCT CGGCGGTCGC GACCGGCGTG CGTCTGCTGC CGTTGTCCAT CGCCCTGCTG
GTGGCCGCCG TCGGCATTCC CAAAGCCCTC CCGCACGTCT CACCGCGACG CATCGTCCGT
GGTGGTTTCC TCTCCCTGTT CGCCGGGACA ACGATCCTGG TCGCCGCGCT TGACGCCGGC
GCCGGACCGG AGATCGTGAC CTGGCCGATG CTGCTCGCCG GCCTCGGGGT GGGCGCGCTC
GCGTCCCAGC TCGGCAGCGT CACCGTGTCC GCGGTCGCCG ACGAGCACAC CGGCGAGGTC
GGTGGGGTGC AGAACACGGT GACAAACCTG GGCGCGTCGA TCGGTACCGC GGCAGCTGGG
GCAGTTCTCA TCTCCGCGCT GACCTCGTCG TTCCTCACCG GCATACGGCA CGACCCCGCC
GTACCGGCGG AGCTGAGCAC GCAGGCCGAG GTGCGCCTGG CCGAGGGCGT CCCCTTCCTG
TCCGACCGGG ACCTGAAGAT CCGGATCGAC GAGGCCGGCG TCCCGCCGGA CACCGCCAAG
GTGATCACCG CCACCAACGC GGACGCCCGC ATCGACGGCC TGCGTGCGGC TCTGTCGCTG
CTCGCCGCCA TCGCCCTGGC CGCGATGTTC CTCACCCGCC AGATCCCGGA CCGGCAATCC
GCTCCGGTGC CGGTTTCCGG CCGGGTCACC TGA
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| Protein sequence | MTPRAAGIQS PGAGPEAASA GLVVLPTLAA AQFLMTLDSS VMNVSIATVA ADIGTTVTGI
QTAITFYTLV MAAFMITGGR LGQLFGHRRV FTIGCVVYGC GSLTTSVAGN LAVLMFGWSF
LEGIGAALIM PAVVALVASN FASAQRPRAY GLVAAAGAIA VAAGPLVGGL FTTYLSWRWV
FAGEVLVVAV ILWLTRGMAD TPPTAQGRLD IVGTVLSAAG LALIVYGVLR SGSWGLVRPA
PGAPVWLGLS PVIWLVLAGG TILLLFVRWQ DHRLARGAAA LLDPVLLRNR TFRAGLTSFF
FQYLLQAGLF FVVPLYLSVA LGLSAVATGV RLLPLSIALL VAAVGIPKAL PHVSPRRIVR
GGFLSLFAGT TILVAALDAG AGPEIVTWPM LLAGLGVGAL ASQLGSVTVS AVADEHTGEV
GGVQNTVTNL GASIGTAAAG AVLISALTSS FLTGIRHDPA VPAELSTQAE VRLAEGVPFL
SDRDLKIRID EAGVPPDTAK VITATNADAR IDGLRAALSL LAAIALAAMF LTRQIPDRQS
APVPVSGRVT
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