Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5192 |
Symbol | |
ID | 5673526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6234920 |
End bp | 6235699 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244046 |
Product | TrkA domain-containing protein |
Protein accession | YP_001509456 |
Protein GI | 158316948 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0506525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGG ATCCGGACGC GCGTACCGGG GGCACCGAAC AGGACGGGGC CGCCGAGCGG AGCGGGGTGG CGAACCGGCG GGTGGCGATC GCGGGCGCCG GCAAGGTCGG CCGCTCGATC GCCGCGGAGC TGCTGGAGAA CGGCTCCGAG GTGCTCATCA TCGAGCGCGA CCCGAACAAG ATCCGCCGGG ACGCGCTGCC CGCGGCGGAC TGGCTGCTCG CCGACGCCTG CGAGCTGTCC TCCCTCGACG GCGCCGGCCT GGACTGCTGC GCGGTGATGG TCGCCGCCAC CGGCGACGAC AAGGTCAACC TCGTGGTCTC GCTGTTGGCG AAGACCGAGT TCGGCGTGCC CAGGGTGGTC GCGCGGGTCA ACCATCCCAA GAACGAGTGG CTGTTCACCG AGTCCTGGGG CGTCGACGTG GCGGTGTCCG CGCCGCGCAT GCTGACCGCG CTGGTCGAGG AGGCGGTGAG CGTCGGTGAC CTGGTGCGCC TGATGAAGTT CCGCCAGGGC GACGCCTCCC TCGTCGAGCT CACCCTGACC GCGGACGCGC CCGTCGTGGG CCGGCGGCTG GGCGACGTCG ACCTCCCGCC GGACTCCGCC GTCGTCGTGA TCCTGCGGGA CGGCAACGCG GTGGTCCCGT CGCCGGACAG CACGCTCGAG CCGGGCGACG AGGTGCTGGC CGTCGCGACC ACGAGCGAGG CCGAGGAGAG CCTCGCGGCG CTGCTCGGCG CCGTCCCCGC CGACGCCAGC CGGAACCAGC GCGTCTCCGG AGTGCTCTAG
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Protein sequence | MTADPDARTG GTEQDGAAER SGVANRRVAI AGAGKVGRSI AAELLENGSE VLIIERDPNK IRRDALPAAD WLLADACELS SLDGAGLDCC AVMVAATGDD KVNLVVSLLA KTEFGVPRVV ARVNHPKNEW LFTESWGVDV AVSAPRMLTA LVEEAVSVGD LVRLMKFRQG DASLVELTLT ADAPVVGRRL GDVDLPPDSA VVVILRDGNA VVPSPDSTLE PGDEVLAVAT TSEAEESLAA LLGAVPADAS RNQRVSGVL
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