Gene Franean1_4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4632 
Symbol 
ID5672975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5525323 
End bp5526531 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID641243490 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001508906 
Protein GI158316398 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA ACCCGTTGAA GGACAGCCTG GCCGTGGTGG GTGTCGGGTC GACGCCCTAC 
GGCCGTGACC TGAAACGCAC CGAGCTGTCG CTCGCCCTTG AGGCGGCCGT CGGCGCCATC
GAGGACGCCG GTATCGACCG GCAGGAGATC GACGGTGTCT GCGGCACGGG CATGGACCCG
CTGTCCATGG GCGGAGCCGG GTTCCTGACG CTGCAGGGCG CGCTCGGGAT CGAGAAGACC
ACCTGGCAGA AGAACGGGTG GCTCGGATCA TGCTTCGTCT ATGCAGCCGA AGCGGTGTTC
TCCGGCCTGT GCGACGCGGT CCTGGTGGTA CAGGCCTACA CCCGCAGACC CGAGATGTCG
CGGTCCGCCG CGAACGACCC GTTCCGCCTC CGGGCGGCGC AACTGCGCGC GGCGAGCCAC
GCGCCCATAG GCCGGGACGA CTTCGCTCGC CGCTGGCTGC ACTCCGGTGA GCCGTATGCC
GCCTGGATGG CGCGCTACCT GCATGACTAC GGAGCGACGA AGGACGTCTT CGCCCGCATT
GCCGTGAACA ACCGCACCCA CGCGACGAAG AACCCCAATG CAGCCATGCG AACCCCGATC
ACGATGGAGG ACTACCACGC CTCTCGCGTG ATCTGGGAGC CCATGCAGAT GCTCGACATG
GACGTGCCCG TCGACTGCGC GGAAGCTCTG ATCATCACGA CCGCCGAACG GGCAATGGAT
CTGCGCCACA AGCCTGTGTA CATCCACGCC ATGTCGCTGG GCGGTTCACG GGTCGGGGAG
TACTACGACA ACAGCCTGGG CTGGACCGAG AACGCTCTGT GGACCTCCCT GGCCGGCCTC
TGGGAGCGCA GCGACCTGAC CGTCAACGAC CTCGACCTCT TCTTCCCTTA CGACGGCTAC
ACCATCGACA CCGTGGGGTG CATCGAGGCG GCCGGGTTCT GCAAGCCGGG CGAGGCCGGC
GACCTGCTCG CATCGTCGTG GGACGCCCAG GCGAACATCC TTCGCCTCGG CGGACACACA
CTCGTCACAA CCAATGGGGG TGGGCTGTCG CAAGGACGGG CGGGGGGCTT CAACTTCTAC
ACCGAGGCGG TACGACAGCT GCGGGGCACC GAGGGTGAAC GTCAGGTTCC CGGTGCCAGG
ACGGCGCTGC TCTGCCCCGG CGCCAGCTTC TTCCACGACC CGGCGTCGAT CATGTTGCGC
ACAGACTGA
 
Protein sequence
MARNPLKDSL AVVGVGSTPY GRDLKRTELS LALEAAVGAI EDAGIDRQEI DGVCGTGMDP 
LSMGGAGFLT LQGALGIEKT TWQKNGWLGS CFVYAAEAVF SGLCDAVLVV QAYTRRPEMS
RSAANDPFRL RAAQLRAASH APIGRDDFAR RWLHSGEPYA AWMARYLHDY GATKDVFARI
AVNNRTHATK NPNAAMRTPI TMEDYHASRV IWEPMQMLDM DVPVDCAEAL IITTAERAMD
LRHKPVYIHA MSLGGSRVGE YYDNSLGWTE NALWTSLAGL WERSDLTVND LDLFFPYDGY
TIDTVGCIEA AGFCKPGEAG DLLASSWDAQ ANILRLGGHT LVTTNGGGLS QGRAGGFNFY
TEAVRQLRGT EGERQVPGAR TALLCPGASF FHDPASIMLR TD