| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4562 |
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| Symbol | |
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| ID | 5672909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5442779 |
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| End bp | 5443543 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243425 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508841 |
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| Protein GI | 158316333 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.818797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAGCG CCGACGGCCA ACCCGCCGGC CTGTTCGACC TCACCGGCAA GATCGTCCTG
GTCACCGGCG GCAGCCGGGG CCTCGGCCGG GAGATGGTGC TGGCCTTCGC CCGCGCCGGC
GCCGACGTGG TGATCGCCAG CCGCAAGCTC GACAGCTGCG AGCAGCTGGC GGCACAGGTC
GAGGAGCTCG GCCGGAAAGC CCTGCCGGTC GCGGCCCACG TCGGGCGCTG GGCCGAGTGC
GATCACCTCG TCGACCGGGC CTACAGCCAT TTCGGCCGGG TCGACGTCCT CGTCAACAAC
GCCGGCATGT CACCGCTGGC GCCGTCCTCG GCGCAGACCT CCGAGGACCT CTTCGACAAG
GTGCTCGGGG TCAACTTCAA GGGCCCGTTC CGGCTGAGCT CGCTGATCGG ACAGCGGATG
CACGACGGCG ACGGCGGCTC CATCATCAAC ATCTCGTCCA GCGGCGCGCT GTTCCCGTCC
CCCCGGTTCG GGCCGTACGC CGGCGCGAAG GCGGCGCTCA ACGCGCTGAC CACCGTGCTC
GCCCTGGAGT TCGCGCCCAA CGTCCGGGTG AACACGATCT CCGCGGGGCC GTTCCTCACC
GACATCTCCA AGCACTGGCC CGACGAGAGC AAGCGGACGT GGAAGAACGC GGCCGGCCGC
GCCGGCAACC CGGAGGAGAT CGCCACCACC GCGCTCTACC TGGCCTCCCC GGCCTCGAGC
TATACCACCG GATCACTCAT CCGGGTCGAC GGCGGACTGC ACTGA
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| Protein sequence | MTSADGQPAG LFDLTGKIVL VTGGSRGLGR EMVLAFARAG ADVVIASRKL DSCEQLAAQV
EELGRKALPV AAHVGRWAEC DHLVDRAYSH FGRVDVLVNN AGMSPLAPSS AQTSEDLFDK
VLGVNFKGPF RLSSLIGQRM HDGDGGSIIN ISSSGALFPS PRFGPYAGAK AALNALTTVL
ALEFAPNVRV NTISAGPFLT DISKHWPDES KRTWKNAAGR AGNPEEIATT ALYLASPASS
YTTGSLIRVD GGLH
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