Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4476 |
Symbol | |
ID | 5672826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5340390 |
End bp | 5341211 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641243343 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001508759 |
Protein GI | 158316251 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAAAG TTCAGGGCAA GGTGGCATTC GTGACGGGCG CCGGGCGGGG GCTTGGAAGG AGCTTCGCTG CCCGGCTGGC CGAGGAGGGC GCGGACATCA TCGCGACGGA CGTCTGTTCA CCTGTGTCGT CGGCGCCGTA CGGAATGGCG AGTTCGTCGG ATCTTGACCA GACCGTGGCG GAGGTCCGGG CGCTTGGCCG ACACGCGGTC GCGTTCGAGT CCGACGTCCG GGACGGGGAG TCGATTCAGG CGGGGCTGGC CAAGGCGGTC GTCGAACTCG GCCGCCTCGA CATCGTGTGC GCGAACGCAG GTTTCATCTC CTACGGTGCC GCGGTCGATC TCGCCGAGAC CGAGTGGAAC GAGATGATCG ATGTCCATGT GACTGGCGCC TGGAACACCT GCAAGGCTGC CGTGCCCTAT CTGATTCGGT CCGGTGTGGG AGCATCCATA GTCTTCACCA GCTCCATGGC GGGTCTTCGT GCCCGCCCGG GCATCGGCCA TTATGTCACG GCCAAACACG CGGTTGTCGG CCTGATGCGC ACCTTCGCGA TCGAACTGGC GCCGTTCGGC GTCCGGGTCA ATTCAGTGCA TCCGACGTCG ACGAACACGC AGATGATTCA GAACAGCGCG ACCCGTCAGG TGGCCGACGG AGACGGAGCG GACGGTTCGG TCGAGGAGCG CAGGAAGTCC GGCAGGCTCC TCGATGTGCC GTGGATCGAG GCGATCGACG TGGCGAACGC TGTCCTCTTC CTCAGCTCGG AGGATGCCCG CTACATCACC GGGGTGACGT TGCCCATCGA CGCGGGTGCC ATGTTGGTCT GA
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Protein sequence | MAKVQGKVAF VTGAGRGLGR SFAARLAEEG ADIIATDVCS PVSSAPYGMA SSSDLDQTVA EVRALGRHAV AFESDVRDGE SIQAGLAKAV VELGRLDIVC ANAGFISYGA AVDLAETEWN EMIDVHVTGA WNTCKAAVPY LIRSGVGASI VFTSSMAGLR ARPGIGHYVT AKHAVVGLMR TFAIELAPFG VRVNSVHPTS TNTQMIQNSA TRQVADGDGA DGSVEERRKS GRLLDVPWIE AIDVANAVLF LSSEDARYIT GVTLPIDAGA MLV
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