Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4452 |
Symbol | |
ID | 5672803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5318449 |
End bp | 5319591 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243320 |
Product | ABC transporter related |
Protein accession | YP_001508736 |
Protein GI | 158316228 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA AAGTCGATGG CATCGTCAAG CGGTTCGATG GCCGTCCCCC GACGGTGGCG ATCGACCACC TCCAGCTGAC CATCGACGAC GGGGAGTTCA TCGTCCTGCT CGGCCCGAGC GGATGTGGCA AGACCACGAC GCTGCGGTGC ATCGCGGGGC TGGAGTCTCC CGACGAGGGT CGGATCGAAC TGCAGGGCAA GGTCGTCTAC GACTCGGCCA CCAGGATCAA TCTGCCGCCG GACCGGCGCA GCATCGGCAT GGTCTTCCAG AGCTACGCGC TCTGGCCGCA CCTCTCCGTC CGCCGCAACA TCGCGTATCC GCTGCGGGCC CGGAAGCTGT CGCGGGGGAT CGCTGAGGAC TGGGTCGGGG ACATGGCGCG TCTGGTCGAC TGCGAGAGCC TGCTCGATCG GCTTCCCAGT GAGCTCAGTG GCGGGCAGCA GCAGCGGATC GCGTTGGCCC GCGGCCTCGT CGCCCGGCCG GAGCTGGTTC TTCTCGACGA GCCGATGTCG AACCTCGACG CGAAGCTCCG GGACCAGGTC CGGGCCCAGA TGCATGAGTT GCATGCTGAT CTCGGCTTCA CGGCGGTCTT CGTGACCCAC GACCAGGCGG AGGCCTTCGC GCTGGCCGAC CGCGCGGTGA TCATGAACAG TGGGCGTATC GAGCAGGTCG ACGATCCGCG GCGGATCTGG GCGGCACCGG CGTCCGACTA CGTCGCCTCG TTCATCGGGA TGGCGAACAG GCTGGAGCTC GAACGCCATC CCGAGGGCTG GCGGATCCCT GGGACGTCCA TGCAGATCCC GTTCGCGGAT CTCGCCGTCG ACCGGTCGCT GTCGAGCGTC GCTCTCCGTA TCCGGGCTGG AGACCTGCGC GTCGTCCCGC CCGACGTTCC TACGGAGGAG GGGACCGTGC ACGTGGTCGG CACCCTGATC GACTCGATCT TCGGTGGCGA CGTGCTCGAC GTGGCGGTGG ATGTCGGCGG CTTCCGCCTG CACGCGCAGT GCGAGCTGGA GGGTACCCAC TGCTGGGTCG ACCAGGTGCC CAGAGGGTCC GAGATCGCCG TCCGGTTCGC CCTGGCCAGA GCCCGCTGCT TCGACCGGGA GACCGGAGCG GCGATGGGCA TCAGTGAACT GTCGGTCGTC TGA
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Protein sequence | MTVKVDGIVK RFDGRPPTVA IDHLQLTIDD GEFIVLLGPS GCGKTTTLRC IAGLESPDEG RIELQGKVVY DSATRINLPP DRRSIGMVFQ SYALWPHLSV RRNIAYPLRA RKLSRGIAED WVGDMARLVD CESLLDRLPS ELSGGQQQRI ALARGLVARP ELVLLDEPMS NLDAKLRDQV RAQMHELHAD LGFTAVFVTH DQAEAFALAD RAVIMNSGRI EQVDDPRRIW AAPASDYVAS FIGMANRLEL ERHPEGWRIP GTSMQIPFAD LAVDRSLSSV ALRIRAGDLR VVPPDVPTEE GTVHVVGTLI DSIFGGDVLD VAVDVGGFRL HAQCELEGTH CWVDQVPRGS EIAVRFALAR ARCFDRETGA AMGISELSVV
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