Gene Franean1_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3826 
Symbol 
ID5672190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4544778 
End bp4545305 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content76% 
IMG OID641242705 
Productphage tail protein 
Protein accessionYP_001508125 
Protein GI158315617 
COG category 
COG ID 
TIGRFAM ID[TIGR02242] phage tail protein domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.713673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0678288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGAT CGGTCGAGGG CCTGGATACT CCGTTCCCGC TGGCGGGCGG GGTACCGGGG 
GTGCTGCTCG GCGCCGGGGC CGTCGGCGCG CTGCTCGCCG CCTTCGACGA GGTGCTGGCG
CCGGTGCTGG CCACGCTCGA CAACGTCGAC GCCTACCTCG ACCCGGATCT GACGCCGGAG
GACTTCCTCG GCTGGCTGGC CGGCTGGCTC GGGATGGCGG TGGACGGCGG ATGGCCGGCC
GACCGCACCC GGGCGGTCAT CCGGCAGCTG CCGGAGGTCC TGCGGTGGCG TGGCACGCCG
GCCGGTGTGG CCGCGGCCGT CCGGGTCCTC GCCGGGGTGG AGGCGGAGGT GACCGACAGC
GGAGGGGTGA ACTGGTCGCC CCGGCCGCAG GGCGAACTGC CGGGCGGTCG CACCCCGTCG
CTTGTCGTCC GGGTGCCGCA GGGCAGCGAT CTGCGGGGGG TGGAGGCGGC CGTCAGGTCG
GCCAAGCCGG CCCATGTCCC GCACCGGGTG GAGGTTCGGC CGGTGTGA
 
Protein sequence
MRGSVEGLDT PFPLAGGVPG VLLGAGAVGA LLAAFDEVLA PVLATLDNVD AYLDPDLTPE 
DFLGWLAGWL GMAVDGGWPA DRTRAVIRQL PEVLRWRGTP AGVAAAVRVL AGVEAEVTDS
GGVNWSPRPQ GELPGGRTPS LVVRVPQGSD LRGVEAAVRS AKPAHVPHRV EVRPV