| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3776 |
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| Symbol | |
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| ID | 5672141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4477008 |
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| End bp | 4478171 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242657 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001508077 |
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| Protein GI | 158315569 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0285977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCC TGCACACCTC GGACTGGCAT CTCGGGAAGA CCCTCAAGGG GCGCAACCGG
CTCGACGAGC AGCGCGCCGT GCTCGGGGAG ATCATCGGGA TCGCCCGGAA GCACGAGGTC
GACGCGGTGC TCGTCGCCGG GGACGTCTAC GACAGCGCGG CCCCGCCGGC GGCGGCCCAG
CAGCTCGCCG TGCAGGCGCT GGTCGCGTTG CGCGGCACCG GCGCCGAGGT GGTCGTGATA
GCCGGCAACC ACGACCACCA GCCGACCTTC GACGCCTACC GGCCGCTGAT GTCGGCCGCC
GGGATCACCC TGGTCGGGAC GCCGCGCACC GCCGCCGACG GCGGGGTGGT CACCTTCCGC
GCCCCCGGCA CCGGCGAACC GGTCACCGTG GCGGCGTTGC CGTTCGTCTC CCAGCGGTAC
GCCGTCCGCG CCGCCGACCT GGTGACCCAG ACGCCCGACC AGACCGCGGC CCGCTACGAC
CAGGTCGTGC GCGCCCTGAT GGAACAGTTG CGCTCCGGCT TCGACGACAA CGCGGTGAAC
CTCGTCCTGG CCCACCTGAC GGTGACGAAC GGCCTGTTCG GCGGCGGGGA GCGGATGGCC
CAGTCGATCT TCGAGTACCA CGTGTCCGCG GCGGCGTTCC CCGCGGACGC CCACTACGTG
GCGCTGGGGC ACCTGCACCG GCGGCAGACC CTCGCCGCGC CGTGCCCGGT GGTGTACTCC
GGCGCGCCGC TCGCGGTCGA CTTCGGCGAG CAGGAGAACA CGAACGTGGT GTGCCTCGTC
GAGGCGAGCC CCGGCGTCCC CGCCCAGGTC ACCGACATCG CGCTGACGGC CGGCCGGCGG
CTGCGGACGG TCCGGGGCAC CGTCGCGGAG CTTGCCGCGC AGGCCCCGGA GCTCGCCGAG
GACCTGCTGC GGGTGGTCGT GCGCGAACCG GCCCGCGCGG GGCTGCGCGA CGAGGTCCAG
GAGCTGCTGC CGAACGCGCT CGAGGTCGGG ATCGACCCGG AGCTCCGGGT GGCGCTCGGC
GGGTCGCGCC CGAGCGCGGC GGCGCTGGCG CGGCGCAGCC CGGAGGACCT GTTCCGGGAG
TTCTGCGCCG CCGAGCAGTT CGAGGATCCC CGGGTCGAGG CGCTGTTCGC CCGGCTGCAC
GACGACGTCT CCAGCGGCGA CTGA
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| Protein sequence | MKFLHTSDWH LGKTLKGRNR LDEQRAVLGE IIGIARKHEV DAVLVAGDVY DSAAPPAAAQ
QLAVQALVAL RGTGAEVVVI AGNHDHQPTF DAYRPLMSAA GITLVGTPRT AADGGVVTFR
APGTGEPVTV AALPFVSQRY AVRAADLVTQ TPDQTAARYD QVVRALMEQL RSGFDDNAVN
LVLAHLTVTN GLFGGGERMA QSIFEYHVSA AAFPADAHYV ALGHLHRRQT LAAPCPVVYS
GAPLAVDFGE QENTNVVCLV EASPGVPAQV TDIALTAGRR LRTVRGTVAE LAAQAPELAE
DLLRVVVREP ARAGLRDEVQ ELLPNALEVG IDPELRVALG GSRPSAAALA RRSPEDLFRE
FCAAEQFEDP RVEALFARLH DDVSSGD
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