| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3554 |
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| Symbol | |
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| ID | 5671923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4216322 |
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| End bp | 4218112 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242440 |
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| Product | ABC transporter related |
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| Protein accession | YP_001507860 |
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| Protein GI | 158315352 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.32539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCGGC GGCTGTTCAA CCTGCTCGGC CCGGAGCACC GGGGCGAGCT GCGGAGCCTG
CTCGGCTGGC TCGTCGGCGC GGCCGTCCTG CAGGGCGTCG CCTTCGTGCT GCTGGTGCCG
ATCCTGCGCG CGCTGCTCGG CGACGACCCG AATGAGGTCT GGCCCTGGAT CTGGGCGCTC
GCGGCGACGA CGGCGGGCTA CGGGTTCGCG CATCGGGTGG GCCTGTTGGC CAGCGCCGAC
GCGGGCGCCG GCCTCTCACG CACCGTGCAC CACCGCATCG GCGACCGGGT CGCGGGCCTC
CCGCTCGGCT GGTTCTCGGC CGACCGGACG GCGGCGGTCA ACCAGCTCGC GACGCGGGAC
GTGATGGACG TCATGGGCGT GTTCGCGCAC CTGCTGCGGC CACTGCTGAC CGGTTTCGTG
ACCCCCGGTG TCGTCGTCGC GCTGATGTAC GTCTTCGACT GGCGGCTCGC GCTCGCCGCC
ACGCTCACCG TCCCGATGCT CGCACTGGTC TACCGGTGGA GCACCCGGCT CGCCCACCAG
GCCGACGCCG CCAGCGACGC CGCCCAGGTG GACGCCGGCG GGCGGGTGCT CGAGTTCGCC
CGGGCCCAGC GGGTGCTACG GGTGTTCGGC CGCGGGGCGA CCGGGTCCGC CGCCCGGGCG
CTCGACGAGG CCCTGGAGCG GCAGCGGGCG GCCGGGCACC GGCAGTTGCG GGTGGCGGTG
CCGGGGCTGA TCGGTTTCGC GGTCGCGGTC CAGGCCGCGT TCACCGTGGT GATCATCCTC
GGCACCTACC TCGCGCTCGA CGGCTCGCTG GACGCGCCCA CGCTGCTCGC GGTCCTCGCC
CTGGCGGCCA GGTTCATCGA GCCCGTCGCG GAGGCCGCGG CGCTGGGCAC CGAGCTGCAG
AAGGCCAGCC GTGCCCTCGA GCGCATCGAG AACCTGCTCG CCCTGCCGAC GCTGCCGCAA
CCGGCGGCCC CCCGGCACCC CGAGGGCACC GGCATCGAAC TCGACAACGT CGTGTTCGGG
TACGAGGGCC GCCGCGTGCT CTCCGGGGTG TCCGCCCGGC TGCCCGAGGG CACGATGACC
GCGCTGGTGG GCCCATCGGG CTCCGGCAAG ACCACGATCA CCCGGCTCAT CGCACGTTTC
TGGGACACGG ACTCGGGAGC CGTGCGGATC GGCGGGGTCG ACGTCCGGGA GATCGATCCC
GACGAGCTGA TGTCGCTGAT CTCCGTGGTC TTCCAGGACG TCTACCTGTT CGAGGGCAGC
ATCGAGGACA ACATCCGGGT CGGGCGTCCC GGGGCGAGCG CCGAGCAGGT GCGCGAGGCC
GCGCGGCTGG CCCGGGTCGA CGAGATCGTC GCGCGGCTGC CCGAGGGCTG GGACACCCGC
GTCGGGGAGG GCGGCAGTGC CCTGTCCGGC GGCGAGCGGC AGCGGGTCTC CATCGCCCGC
GCGATCCTCA AGGACGCCCC GATCGTGCTG CTCGACGAGG CGACGTCCGC GCTGGACCCG
GAGAACGAGC AGGCCGTCCA GGAAGCTCTG GCCGCGCTGG CGAGCAACCG CACGCTGCTC
GTGATCGCGC ATCGGCTGGG GACGGTGATG GCGGCCGACC AGATCCTCGT CCTGGAACGC
GGGCTTGTCG TCGAGTCCGG AACCCATGCC CAGCTCATCG GGACCGGCGG CCGGTACGCG
GCCTTCTGGC GCCGCCGCCG CGGCGCCGAG GGCTGGCGTC TGGCGCCCGG CGCCGTTCCC
ACCGGTGAGT CCGCGCTCGC CCGTCTTCCC CACCCGGCCG CGGGCCGCTA G
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| Protein sequence | MIRRLFNLLG PEHRGELRSL LGWLVGAAVL QGVAFVLLVP ILRALLGDDP NEVWPWIWAL
AATTAGYGFA HRVGLLASAD AGAGLSRTVH HRIGDRVAGL PLGWFSADRT AAVNQLATRD
VMDVMGVFAH LLRPLLTGFV TPGVVVALMY VFDWRLALAA TLTVPMLALV YRWSTRLAHQ
ADAASDAAQV DAGGRVLEFA RAQRVLRVFG RGATGSAARA LDEALERQRA AGHRQLRVAV
PGLIGFAVAV QAAFTVVIIL GTYLALDGSL DAPTLLAVLA LAARFIEPVA EAAALGTELQ
KASRALERIE NLLALPTLPQ PAAPRHPEGT GIELDNVVFG YEGRRVLSGV SARLPEGTMT
ALVGPSGSGK TTITRLIARF WDTDSGAVRI GGVDVREIDP DELMSLISVV FQDVYLFEGS
IEDNIRVGRP GASAEQVREA ARLARVDEIV ARLPEGWDTR VGEGGSALSG GERQRVSIAR
AILKDAPIVL LDEATSALDP ENEQAVQEAL AALASNRTLL VIAHRLGTVM AADQILVLER
GLVVESGTHA QLIGTGGRYA AFWRRRRGAE GWRLAPGAVP TGESALARLP HPAAGR
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