Gene Franean1_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3253 
Symbol 
ID5671627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3850061 
End bp3850552 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content71% 
IMG OID641242145 
ProductMarR family transcriptional regulator 
Protein accessionYP_001507565 
Protein GI158315057 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAT TCGAGCTGTT CCAGTTGGGT CGCAGGCTGA TGAAGCTCGG TGAGCAGGCG 
ATCCCCGAGC TCGGGCTCCG GCAGCTGTCC GCCCCGACGC GCGCGGTCGT CTTCGACGTC
TTCGGCAACC CGGGCAGCTC GATCTCGGAC ATCACCGCGC GGGTCAAGTT CCCGCAGAGT
CAGGTCTCGG CGTGCGTGGC CAGGTTGCGC GAGGCGGGCG TCGTCGAGAC GGTCACCGAC
CCCGCCGACC GCCGCCGGAC CCTCGTGCGT CCCACCGCCG AGGCGTTGCG GCGGTCCCAG
GACCGGCCCC CGGCGCAGAT CGACGACGCG TTGTCCGGGG CGACAGGCAG TACCGACCCG
GCGGAGATCC AACAGCTGAA GGACGCGCTC ACCACCCTGG CCGCCCTGCT CGACCGCCGC
CGGCCCGATC CGGTCGGCGA TCCGGCGGGC AACTTGTGGC AACCCGTTGC TGATCGGCTT
CCGGATCGCT GA
 
Protein sequence
MDGFELFQLG RRLMKLGEQA IPELGLRQLS APTRAVVFDV FGNPGSSISD ITARVKFPQS 
QVSACVARLR EAGVVETVTD PADRRRTLVR PTAEALRRSQ DRPPAQIDDA LSGATGSTDP
AEIQQLKDAL TTLAALLDRR RPDPVGDPAG NLWQPVADRL PDR