Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3045 |
Symbol | |
ID | 5671424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3578882 |
End bp | 3579868 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641241943 |
Product | periplasmic binding protein |
Protein accession | YP_001507363 |
Protein GI | 158314855 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTA CCAGACCACG GCGCCGCAGT GCGGCCCTGG TCGCCGCGTT GCTGGGCACC GTGATCCTCC TTGCGGGGTG CGGCAGCGAC GACAGCGACG ATCAAGGTGG CGCGGTCGGA GCGACCCGCA CTGTGGAGGC CGACAACGGC GCGGTCGAGA TTCCGGCGCA CCCGCAGCGG ATTGCAACGC TCGGGAGACT AACCGTGTCG TTCCTCGACC TCGGCGGCGA GCCAGTGGGC GTCACGGAGG TGGACGCTTC CGTGCTCGAC GTACTGCCCG AGGAGCAGCA GGCCGCGTAC AAGGCGGCCA AGCTCCTCGG CTCCGGCGCC AGCGAAGCCG ACCTCGAGCT GCTGGCCACC CTCAAGCCCG ACCTCATCTT GTTCTCCGCA CCTGACTCCG ACTTCGAGCA GATGAAGTCG CAACTGGAAT CGATCGCACC GACGATCTTC TTCGGATTCA GCTCGGACTG GAAGACCCGC CTGTCCGTGA CCGCGGATGC CACTGAGTTG ACAGATGCTC TCAACGAGCA GAAGACCGAG TATGAGGAGA AGCTCGCCGA GTTCCAGAAC AAGTACCCGG AGATCATAAA GACCACCAAG TTCGGCGAAG TCAACAGAGG TTCTTGGCAG GACGCAGGAA TGTTCACCCT CAACGGCTCG CAGTGCTCGG AGATAGCGCG AGCGGACATT CCCCTCGACA TACCCGATCT GGGCGAAGGG GGCGAGGAGC GATCGTTCGA GCAGATCGGC GGCCTGTCCG AGTACGACGT GCTCCTGTAC CCCGTGGACG CTGAGGGTAA GGTCACGGAA GGCTTCGCCC CCGTGGCGGA ATCGGGCGCA TGGAAGGCCC TTCCCGCCGT GACCTCGGGC AAGGCCCTGG GTGTCTACTG CTTCGGCGAT GTCAGCTTCA CCAGATCCTA TCGGACCTAC TCTCAATACC TGGATTCGCT CGGCCAGGCG CTGGCGAAGC TCGCGACGGC GGGATGA
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Protein sequence | MTFTRPRRRS AALVAALLGT VILLAGCGSD DSDDQGGAVG ATRTVEADNG AVEIPAHPQR IATLGRLTVS FLDLGGEPVG VTEVDASVLD VLPEEQQAAY KAAKLLGSGA SEADLELLAT LKPDLILFSA PDSDFEQMKS QLESIAPTIF FGFSSDWKTR LSVTADATEL TDALNEQKTE YEEKLAEFQN KYPEIIKTTK FGEVNRGSWQ DAGMFTLNGS QCSEIARADI PLDIPDLGEG GEERSFEQIG GLSEYDVLLY PVDAEGKVTE GFAPVAESGA WKALPAVTSG KALGVYCFGD VSFTRSYRTY SQYLDSLGQA LAKLATAG
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