| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2480 |
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| Symbol | |
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| ID | 5670876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2957685 |
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| End bp | 2959325 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241397 |
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| Product | putative ribonuclease BN |
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| Protein accession | YP_001506818 |
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| Protein GI | 158314310 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG0778] Nitroreductase
[COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.422158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCG GCGCTCGGCT GGATCGGGCA CAGCAGAGCA GGCCGAGGAT CGCATTCCCG
CTCGCGGTCG TCTACAAGTT CGCGGAGGAC CAGGGCGGCT ACCTCGCCGC GCTGATCGCG
TTCTACGGAT TCCTCTCCCT GTTTCCGCTG CTCCTGCTGC TCACGACCGG CCTCGGCTTC
GTCCTCGCGG GGCATCCCGA CATCCAGGAG CAGGTGGTGA GCTCCGCGCT CAGCCAGTTC
CCGATCATCG GTGACCAGCT CCGCAGCGAC GTCCAGGCCC TGCGCGGGAG TGCCGTGGCG
GTGGCGATCG GTGTGCTCGG CAGCATCTGG GGCAGCCTCG GGGTGGCCCG CGCGCTCGGG
AACGCGCTGG ACACGGTCTG GGCGGTGCCA CGGCGCTCGC GGCCGAACCC CTTCTTCGCC
CGGGTGCGCA GCTTCGGCCT CATCGGCTTG TTCGGGCTCG GTGTCGTGCT GACGACCCTG
CTGTCCGCGA TCACCACCCG GGCCGGCGAC CTCGGCACCG GTCTCGGTGC CGGCGCGCAG
GTTCTCGCGG TGGTGCTCGG CATCGCCGGG AACACGGGCC TGATCCTGAT GGCGTTCCGG
CTGCTCACGG TCAAGTCGGT GACGTTCGGC CAGATCCTGC CCGGAGCCGC GATCGCCGCG
CTGGGCTGGC AGCTGCTCCA GTCGGCCGGG ACCTACCTCC TCCAGTACCA GCTACAGGGG
CGCACGCAGG TCTACGGCCT GTTCGCGCTG GTCCTCGGCC TGATGACCTG GCTGTACCTG
CTCGCCGCGG TGATCGTGTT CGCGATGGAG ATCAACACCG TGCGCGCCGA ACGGCTCTAC
CCGCGCGCGC TGCTCACCCC GTTCGTGGAC GACGTCGTCC TCACCGACTC CGACCGGCGG
GTCTACACCT CGTACGCCCA GGCGGAGCAG TTCAAGAGCT TCCAGCAGGT CGACGTCTCC
TTCGACGACG TCTCCGTCGG TGACGCCTCG TCCAGTGACG CCTCCGTCGA CCAGGATCGA
CCCATGGAGC TGACACACGC GATGCGCACG ACGGGCACCT GCCGGCGGTT CCGACCCGAC
CCGGTGCCCG ACGACGTCCT CGTCGCCGCG TTCGACGCCG CCCGGTTCGG CCCGCAGGGC
GGGAACCGCC AGCCGGTGCG GTTCGTGGTC GTCCGGGACC CGGAGCGCCG GCGGGTGCTC
GCCAACCTCT ACCTGGCCCG CTGGCAGCCC TACCTCGACG AGCGCGGGAT CAGTACGCCG
ACCGAGGCCG ACCACTTCGC GCGCACCCTG GCGGACGTCC CCGTGCTGAT CGTGGTGTGC
GCGAAGCTCG CGGCGCTGCA TCCCACCGAC ACCGAGCTCG ACCGGCTGAG CATCGTCGGC
GGGGCGTCGG TCTACCCGAT CGTGCAGAAC CTCTGCCTCG CGCTGCGCGG CGCCGGGGTG
GCCACCGCCC TGACGACGCT GCTGGTCGCC GACGAACCGA AGGTCGCCGA GCTGCTCGAC
ATACCGGACG GCTACGCGAC CGCCGCGCAC CTCGCGGTCG GCTATCCCGA GCGCGGATTC
CCCAGCAACC TGCGGCGCCG TCCCGTCGAG GAGCTCGTCT TCGGGGAGGC CTTCGGACGC
CCGCTGGGCG AGGCTGGATG A
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| Protein sequence | MALGARLDRA QQSRPRIAFP LAVVYKFAED QGGYLAALIA FYGFLSLFPL LLLLTTGLGF
VLAGHPDIQE QVVSSALSQF PIIGDQLRSD VQALRGSAVA VAIGVLGSIW GSLGVARALG
NALDTVWAVP RRSRPNPFFA RVRSFGLIGL FGLGVVLTTL LSAITTRAGD LGTGLGAGAQ
VLAVVLGIAG NTGLILMAFR LLTVKSVTFG QILPGAAIAA LGWQLLQSAG TYLLQYQLQG
RTQVYGLFAL VLGLMTWLYL LAAVIVFAME INTVRAERLY PRALLTPFVD DVVLTDSDRR
VYTSYAQAEQ FKSFQQVDVS FDDVSVGDAS SSDASVDQDR PMELTHAMRT TGTCRRFRPD
PVPDDVLVAA FDAARFGPQG GNRQPVRFVV VRDPERRRVL ANLYLARWQP YLDERGISTP
TEADHFARTL ADVPVLIVVC AKLAALHPTD TELDRLSIVG GASVYPIVQN LCLALRGAGV
ATALTTLLVA DEPKVAELLD IPDGYATAAH LAVGYPERGF PSNLRRRPVE ELVFGEAFGR
PLGEAG
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