| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2288 |
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| Symbol | |
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| ID | 5670687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2733847 |
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| End bp | 2734680 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241208 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_001506629 |
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| Protein GI | 158314121 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00127376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.752795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAC TGAATCCGGC AAATGTGAGC ACATCTCGGA GCGGGCACGC GCTGCGGGTG
CCGCGGCGCG GCGGCGAGGG TGCCGTCACG GCCGCGTCTG ACGGATCCGG CGCCGGATCA
GCCGGCCCAC CGCGGATCCC ACTGCTCCCC GAGAACAAGG TCGGTCAGCA GGTCCGCGTG
CCCAAGACCG CCGAGCTCGT CGCGGCCCAG CTCCGCCGCC AGATCGTCCG TGGTGAGCTC
GTCGAAGGCG ACGCCCTACC CCCCGAAGCC GTCCTCATGG AACAGTTCGG CGTCTCCCGC
CCCACCCTGC GCGAAGCCTT CCGCGTCCTC GAATCCGAAG CCCTCATCTC CGTCCGCCGC
GGCGCCCACG GCGGCGCCCG CGTCCACACC CCCGACGGCC AGGTCGCCGC CCGCTACGCC
GGCCTCGTCC TCGAACACCG CCACACCACC CTCGCCGACG TCCACACCGC CCACACCCTG
CTCGAACCCG CCGCCGTCCG ACTCCTCGCC ACCCACCACA CCGACACCAC CCTCACCACC
CTCCACACCG CCCTCACCCA CCCCGACCCC ACCCACTTCC ACCACCAACT CCTCGAACAC
GCCGGCAACC AGACCCTCAC CATGATCGCC GGCATGCTCC GCCACATCCT CGACACCCAC
ACCACCACCC CCCACCCCAC CCACACCACC CCCCACAACC ACCACGACCA CACCCACCTC
CTCGACCTCA TCGCCCGCCA CGACACCGAC GCCGCCGAAG CCCACTGGCG CACCCACATC
GCCACCACAC CCAGCCAGCC ACCCAGCACC GTCATCGACC TGCTCGGCGA ATAG
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| Protein sequence | MALLNPANVS TSRSGHALRV PRRGGEGAVT AASDGSGAGS AGPPRIPLLP ENKVGQQVRV
PKTAELVAAQ LRRQIVRGEL VEGDALPPEA VLMEQFGVSR PTLREAFRVL ESEALISVRR
GAHGGARVHT PDGQVAARYA GLVLEHRHTT LADVHTAHTL LEPAAVRLLA THHTDTTLTT
LHTALTHPDP THFHHQLLEH AGNQTLTMIA GMLRHILDTH TTTPHPTHTT PHNHHDHTHL
LDLIARHDTD AAEAHWRTHI ATTPSQPPST VIDLLGE
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