Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2121 |
Symbol | |
ID | 5670521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2546208 |
End bp | 2549267 |
Gene Length | 3060 bp |
Protein Length | 1019 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641241042 |
Product | glycyl-tRNA synthetase, beta subunit |
Protein accession | YP_001506463 |
Protein GI | 158313955 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCA TGCAGGACGC CCTGCTGACG TTGACCCGCT ACTGGACCGA GCGCGGCTGC ATGATCGTGC AGCCGTTCAA CACCGAGGTC GGCGCCGGTA CGCACAACCC GGCGACCATC CTGCGGGTGC TCGGCGGCGA GCCGTGGCGG GTGGCCTACG TCGAGCCCTC GGTGCGCCCG GACGACTCCC GCTACGGCTT CAACCCGAAC CGGCTGCAGA CCCACACCCA GTTCCAGGTC GTCCTCAAGC CCGACCCGGG CAACCCTCAG GAGCTCTACC TGGGCAGCCT GCAGGCCCTG GGCATCGACA CCGCTGCGCA CGACGTCCGC TTCGTGGAGG ACAACTGGGC CTCGCCGGCG CTCGGCGCCT GGGGGCTGGG CTGGGAGGTG TGGCTGGACG GGCAGGAGAT CACCCAGTTC ACCTACTTCC AGCAGGCCGG CGGCCAGAGC CTGGACCCGG TGAGCGTCGA GATCACCTAC GGGATCGAGC GGATCCTGAT GGTGCTGCAG AAGGTCCGGC ACTTCACCGA GATCGCCTAC GCGCCGGGGG TCTCCTACGG CGAGGTGTTC GGCCAGGCCG AGTACGAGAT GTCGCGGTAC TACCTCGACG AGGCCGACAT CGACACGGTG CGCCGCATGT ACGCCGACTG CGCCGCCGAG GCGCGCCGCC TCATCGACGC CCGGCTGCCC GTGCCGGCGC ACATCTACGT GCTGAAGTGC TCGCACGCGT TCAACATCCT GGACTCGCGC GGCGCGGTCT CCACCACCGA GCGGGCCACC TCCTTCGCCC AGATGCGCGG CATGTCGCGC GAGGTCGCCC AGCTCTGGCG GGACAGGCGC GACGAGCTCG GCGACCCGCT GGGGGAGGCG CCGCGCCTGG CCCCGGCCGC CGCCCGGCCG GTCGACCCGG CCGCCGTGCC GGCGGGGCCG GCCACCCTGC TGTTCGAGAT CGGCACCGAG GAGCTGCCCG CCGCCGAGGT GACCCGCCAG ACGGCCGCCG TCCGCGCGGC CCTCGTCGAG CGGCTCGCGG CGACCCGGCT CACCTATGGC GAGCTGCGGG TGCAGGGCAC CCCGCGGCGC ATCGTCGCGA TCGTCGACGA CGTCGCGCCG CGTGAGCCCG ACGTCGAGCG GGTCGTGCGC GGCCCGCGCC GCTCCGCCGC CTACGACGCC CAGGGCGCGC CGACGAAGGC CGCGACGGGT TTCGTGCGCG GGCAGGGCGG CGACGTGGCG GACCTGACGG TCGTCGAGCA CCGCGGGGTG GAGCACGTCG CCCTGGTGCG CACCGACACC GGCCGTCCCG CGACGGAGGT GCTCGCCGAG GTCCTCGGCG CCGTCCTGGG CGGGCTGCGC GCCGAGCGGA ACATGCGCTG GAACGACCCG GAGCTGTCCT TCAGCCGTCC GGTGCGCTGG GTGGTGGCGC TGCTGGGCGG GGCGGTGGTC CCGGTCGCGG CGTCGACGCT GGCCGCGGGC TCCACCACCC GCGGGCACCG GCGCGCCGGG TCCCCGCCGA TCGAGGTGAC CGGCGCCGTC GGCTACCCGG AGCTGCTCGC CGAGAACTCC GTCCTGCTCG ATCCGGCCGC GCGCCGCGAA CTGATCGTCG ACGAGGCCGC GAAGCTGGCG GCCGAGCACG CGGGCACGAT CGACCTCGAC ACCGAGGCCG ACGTCCTCGA CGAGGTGACC AACCTGGTCG AGTTCCCGCG TCCGGTGCTC GGCTCCTTCG AGCCGCGTTA CCTCGACCTG CCTGCCGAGA TCCTCACCAC CGTCATGCAC AAGCACCAGC GCTACCTGGC GGTGCGGGAC ACGGCCGGGG CGCTGCTGCC CTGCTTCGTC ACGGTCGCGG ACGGCGCGGT GGACGTGCCG CTGGTCCGCG CGGGCAACGA GGCGGTGGTG CGGGCCCGGT TCGAGGACGC GGCGTTCTTC TTCGACGCCG ACCTCAAGGT CCCGCTGGAG ACGTTCCGCG CGGGGCTGGC GAAGCTGACC TTCGAGCAGC GGCTCGGGTC GGTGGCCGAC CGCGCGGAGC GCATCGCGCG GCTGGCCGGC CTGTTCGCGG ACCGGCTCGC CACCTCCGAC GCGGGCGCGC TGTCCCCGGC GGAGCGGCGG ACGCTGGACC GCGCCGGCGA GCTGGCCAAG TTCGACCTCG CCACCCAGAT GGTGATCGAG CTGTCCAGCC TGGCCGGGAC GATGGCCCGC GAGTACGCCC GCCGCGCCGG CGAGCCGGAG GCGGTCGCCG TCGCGCTCCA CGAGATGGAG CTGCCGCGCC GGGCCGGCGG GACGCTGCCG GCCACGGTCC CCGGCGCGCT GCTCGCCCTG GCCGACCGGA TCGACCTGCT TGCCGGGCTG TTCGCGCTCG ACGCGGCGCC CACCGGCAGC TCCGACCCGT TCGGTCTGCG CCGCGCCGCG CTGGGCGTCA CCGCGATCCT GGCCGAGCGG CCGGAGCTGG CCGGGATCAC CGTGGCCGAC ATGCTGGCCG AGGCCGCGAA GCTCGTCCCG GTGCCGGTTC CGGAGGCGGC CCTGGAGCAG GCCGACGCGT TCGTGCGCGG CCGGTTCGCC CAGTACCTGC TCGACACCGG CGTCGACCAC CGGCTGGTCG GCGCGCTGCG CCCGCTGACC GGCCGGCCCG GCCAGGCGAT GGTGACCCTG AAGGCGCTGC GCCCGCTGGT GGAGACCGCG TCGTTCGCGC GGCTGGCCGC CGCCCTGGGG CGGGTCCGCC GGATCGTCCC GGCCGACGTC GCGCCGGGCA TAGAGATCAG CGCCCTCGTC GACCCCGCCG ACCACCGCCT CGCCCAGGCC GTCACCGAGC TGTCCCGCCA GCTGGCGGCG CGCACGGCCG GCCGCCTGCC CGGGCTTGAC GACTTCGTGG CCGCCGCCGG GCAGCTCCCG GACGCGGTCG ACGGCTTCTT CGACGCGGTA CTGGTGATGG CCGACGATCC CGCGCTGCGC GCGGCCCGGC TCGGGCTGCT GGCGGAGATC CGCGACGTCG CCGCCGAGGT GCTGGACTGG GACGCGCTCG GCCCGCTGCC GGCCGCGCCG GGCGGCGCCG ACGGCCCCAC CGGCACCTGA
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Protein sequence | MLTMQDALLT LTRYWTERGC MIVQPFNTEV GAGTHNPATI LRVLGGEPWR VAYVEPSVRP DDSRYGFNPN RLQTHTQFQV VLKPDPGNPQ ELYLGSLQAL GIDTAAHDVR FVEDNWASPA LGAWGLGWEV WLDGQEITQF TYFQQAGGQS LDPVSVEITY GIERILMVLQ KVRHFTEIAY APGVSYGEVF GQAEYEMSRY YLDEADIDTV RRMYADCAAE ARRLIDARLP VPAHIYVLKC SHAFNILDSR GAVSTTERAT SFAQMRGMSR EVAQLWRDRR DELGDPLGEA PRLAPAAARP VDPAAVPAGP ATLLFEIGTE ELPAAEVTRQ TAAVRAALVE RLAATRLTYG ELRVQGTPRR IVAIVDDVAP REPDVERVVR GPRRSAAYDA QGAPTKAATG FVRGQGGDVA DLTVVEHRGV EHVALVRTDT GRPATEVLAE VLGAVLGGLR AERNMRWNDP ELSFSRPVRW VVALLGGAVV PVAASTLAAG STTRGHRRAG SPPIEVTGAV GYPELLAENS VLLDPAARRE LIVDEAAKLA AEHAGTIDLD TEADVLDEVT NLVEFPRPVL GSFEPRYLDL PAEILTTVMH KHQRYLAVRD TAGALLPCFV TVADGAVDVP LVRAGNEAVV RARFEDAAFF FDADLKVPLE TFRAGLAKLT FEQRLGSVAD RAERIARLAG LFADRLATSD AGALSPAERR TLDRAGELAK FDLATQMVIE LSSLAGTMAR EYARRAGEPE AVAVALHEME LPRRAGGTLP ATVPGALLAL ADRIDLLAGL FALDAAPTGS SDPFGLRRAA LGVTAILAER PELAGITVAD MLAEAAKLVP VPVPEAALEQ ADAFVRGRFA QYLLDTGVDH RLVGALRPLT GRPGQAMVTL KALRPLVETA SFARLAAALG RVRRIVPADV APGIEISALV DPADHRLAQA VTELSRQLAA RTAGRLPGLD DFVAAAGQLP DAVDGFFDAV LVMADDPALR AARLGLLAEI RDVAAEVLDW DALGPLPAAP GGADGPTGT
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