| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2067 |
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| Symbol | |
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| ID | 5670468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2490287 |
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| End bp | 2492089 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240989 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001506410 |
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| Protein GI | 158313902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.153764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGCCT CTCCGGGGCG GCGGCTCGGT CATGCCCGAG GGATCGCCGC CCTGCTCACC
GCCCTCCTGA CCACGGTCGC CCTGCTCACT GTCGCGGGAT GCAGCGGCGA GTCGGACCCG
ACGCCGGGCC CGATGGCGGC GAGCCCGACC ACGCCGCCGA CGACCGCCTC CCCGCTCGAG
AAGCCCGGCG GCACGCTGCG CCTGCTGACC GGGCGGATGC CGACCGGCGA CCCCGGGTGG
GCCGACGAGC TGGGGGAGCG GGCGTTCGCC CGGCTGGTGA CCCGCCAGCT CTACAGCTAC
CCCGCCGACG CCGACACCGC CAGGTCGACG ATCCCGCGCC CCGACCTCGC GGCCGGCGCC
CCCGTGGTGA CCATGGGCGG CACCGTCTAC ACCGTGCGGC TGCGCTCGGC GGCCCGGTGG
AACACCCCGA ACCAGCGCCG GATCACCGCG ACGGACGTCG CCCGCGGCCT CAAGCGGATG
TGCGCGCCGC CGTCGCCCTC CCCGCTGCGC GGGTACTACG CGGCGACGGT CGTCGGCTTC
GCCGAGTACT GCGCCGAGCT CGCCGCAGCG CCGGTGGCCG ACGCCCCCGC GCTGATCGAG
AGCGGCACCG TCCCCGGGAT CGAGGTCATC GGCGACGACA CCCTCGCGTT CCACCTGATC
AAGCCGGTCA ACGACTTCGT GGACATCCTG GCCCTGCCGG CCAGCTCGCC GGTGCCGCTG
GAGGCCCTGG CCTACCCGCC GGACTCCCAG CAGTACCTCG ACAACCTGAT CTCCGACGGG
CCGTACCGGT TCGTGTCGGA GCCCGGCGGT GGCTACCGGC TGTCCCGCAA CCCGGCCTGG
AGCGGCTCCT CGGACGGCAT CCGGCGGGCG CTGCCCGACC ACATCACCGT CACCGACGGG
CTCGACCCGG CGACCATCAC GGCGCGCATC GAGGCCGGTG ACGCGGACAT GGCCCTGAGC
GGCGACATCC CCGCCGACGA CCTGGCCCGA CTGGTCGAGA GTGCCGACAA GAAGCTCGTG
GTCGCTCCGA CCGGCCCGGT CGTCGCCCTC GTCGTCGGAC TCAACGGGCC GTCCGCGGCG
GCCCTGCGCG ACCAGCAGGC CCGGGAGGCG CTGGCCTACT GCATCGACCG AACGGCGGTG
GCCGCCGCGC TGGGTGGCCC CATGCTCGCC ACGGCGACGG CCCAGCTCCT GCAGTCGCCG
ATGACCGGCT ACGAGACGTA CAACCCCTTT CCGGCCGGGG ACGGCTCCGG GGACTCACGG
CGCTGCGCCG ACGGCCTCGC GAACAACCCG GGCGGGAAGG TGACGGCGCT GTCCCTGCTG
ACCACGGACA GCGCCACCGA CACGGCGGTG GCCGAGGCGC TGCGCGCCGC GTTCGCCCGC
GCCGGAATCC GCCTCGACCT GCGCATCCGC ACCGGCGCGC AGTACACGGC GGCCGCGTCG
AGCCCTGGCG GGCAGTTCTG GGACCTCGCC CTGACCACGA TCACCCCGGA CTGGTTCGGT
GACGCCGGTC GCACCGTCTA CGAGCCGCTG CTGGACGAGG CCTGGGTGGG CGCCCGGCCG
GCCGACGGCG GCTACCGCCG TCCGGACCTC CTCGCCCGCT ACGAGTCCGC CGTGACGGCC
TCCTCCGAGG ACGACGCCGC CACGGACTGG GCCGGGCTGG AGCGAACGGT GCTGAACGAC
GCCGCGATCG TGCCCCTCGC GGTCACCCAC ACGTTGCGGC TGCGTAGCTC GGCGGTACAG
GCGTTCACGA TCGTGCCGTC GCTGGGAACC GCCGATCCCA CAGCGGTTTC GCTCGGTCCC
TGA
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| Protein sequence | MNASPGRRLG HARGIAALLT ALLTTVALLT VAGCSGESDP TPGPMAASPT TPPTTASPLE
KPGGTLRLLT GRMPTGDPGW ADELGERAFA RLVTRQLYSY PADADTARST IPRPDLAAGA
PVVTMGGTVY TVRLRSAARW NTPNQRRITA TDVARGLKRM CAPPSPSPLR GYYAATVVGF
AEYCAELAAA PVADAPALIE SGTVPGIEVI GDDTLAFHLI KPVNDFVDIL ALPASSPVPL
EALAYPPDSQ QYLDNLISDG PYRFVSEPGG GYRLSRNPAW SGSSDGIRRA LPDHITVTDG
LDPATITARI EAGDADMALS GDIPADDLAR LVESADKKLV VAPTGPVVAL VVGLNGPSAA
ALRDQQAREA LAYCIDRTAV AAALGGPMLA TATAQLLQSP MTGYETYNPF PAGDGSGDSR
RCADGLANNP GGKVTALSLL TTDSATDTAV AEALRAAFAR AGIRLDLRIR TGAQYTAAAS
SPGGQFWDLA LTTITPDWFG DAGRTVYEPL LDEAWVGARP ADGGYRRPDL LARYESAVTA
SSEDDAATDW AGLERTVLND AAIVPLAVTH TLRLRSSAVQ AFTIVPSLGT ADPTAVSLGP
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