Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1455 |
Symbol | |
ID | 5669859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1748997 |
End bp | 1751579 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641240375 |
Product | hypothetical protein |
Protein accession | YP_001505801 |
Protein GI | 158313293 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.316955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAGATGC GTCACAGGTG GAACGAGGGG GATCGACCGG TGGCAGTGCC AGTTGGACTT GCGCTTGAGC AAGCAGGTAG TAGCGAGCCT GGGCTTGAGG TTGTGCTTTC CCACGAGCTC GTTGCGCTTC TCTCGGAGCA GCTCTACCAG TCCCCACTAA AGGCAATAGA GGAACTAGTT GTCAACGCTT ACGATGCAGA CGCACTGCGC TGTAGTGCAG CAATCCCCGC CCTAGGATCG GCATCAGTCG ATATCATGCT TATTATCGAT AATGGTGCCG GAATGGATCA CGAGGGCCTG AAAGATCTAT GGCATGTTGG TCACAGTACA AAGAGAAGCG AAAGAATTGC CACAATTAGA AAAAGAAAGC AGATCGGCAA GTTCGGCATC GGCAAGCTGG CGACATATGC AATAGCAAAC AGAGTCACCT ATGTAACAAA AACAGAGGCC GGCGGGATCC TTACGACTAG CTTGGACTTC TCTCGATTCG AATCAGATCC CACCGGGGGA CGAGACCCTT TGCATCTGGC CGTAACGAAG ATTCGGCCAG GTGCAATTCT CGACAATAAG CTTTTGGTCG ATACGATGAT CGATGCCGGA GTCGATCCAT CGCAATTCAT CGAGGCCAGA TCTTGGACGA TTGTAATTTT GGAAGAACTT AAGCCGAAAG CACAGGGGCT AAAGCTGGGT CGCCTCAATT GGATTCTAAG TACCGCGATG CCCCTACGCG GCACCTTTAA TCTCTATTTG AATGGCGATC AAATTGTCAG CTCCAAAGAA GACTACGAAC GCGTTGCATC TTTCAAAATT AGCGAACTTC CCGATAATCG CCTTAAAGGG CTAGAGAAGT CCACGGGAGA GAAGTGGATT GTCGACGGAG AGAGCGTAAG ATGCGCTTCC TTCCCTCGCG GAATATCGGG AAATGTGATA GTGACAAGAA GGACGATCTT CGCCGGTAAA AGTAGCGACC TAGGTCGCAG TCACGGATTC TTCATACGAG TTCTCGACCG CCTGGTCAAT CTTGAAGATC CGCTTTTTGG TATGCGTCCT CTATCGTATG AGACCTTCAA CCGGTTCCGC GCAGATGTCG ATGTTGATGA TTTGGACGAA TGGCTTACAG CTCCCCGAGA GAGCGTAGAG TCTAGCCCAC AGATGGAGGC ACTTTGGTCT CTCCTTGAGG AACTTTACTA CGAGGCACGC AGCCGGTATA AGGCTTGGCA GACAGAGCAG GAGAAGCCTG AAAAGCAAAA GCCGGAGCAC GATCGACAGC CAGTCGACCC ACGATATCTA GATGATCCGA TCGCAGATGT GCTCTCGCAG AGCGATCAGT TCGAAACTGG CACTACTGAC TCTGGGCTTA CGCTTCCTTT CGAAGACCCT CTTCGATCGC CCGGAGTCGA CGCGGATGAC GAATGGTTCT ATCTCAAGAT ACCGGCGGAT GCAGATATCA AGCGGCTTAT CGAAAGCGCG TATTCCTCTC GCGTAGCACG CAAGTATTCA TATCAGACTA TTAAAGCCGG CTCCACCGGG CGGCTTGTGA AGTTCGACCC CGTTGGCGCC CTTTTTGAAA TAAATGCCGA CCACCCTCTT GTTCGCGCGC ACGCCGACAG CGCGGCTGAA CCATTGCTAG AGGACATTGT TACAGCGGAG GCGCTGCTAG AAGTCTATCT TCGCGAACAA GGTATGAGGG CGGAGATAAT TGGTGAGATC TTGGAGCGCC GGGATCAGCT ATTTCGAGCG CTGACCAAGG ATCGCACCTA CTCTTTCGCG GGAATCGCCG GGGAGCTGAG GGAATCCGCC TCCGATGAAC GAGAGCTAGA GATTAATCTT GTCTTGGCCG CGCGCGCGCT CGGATTCGTC GCGAAGCACA TCTCAGGAGC AAATGAGCCT GATGGCGTTG CACGGTTCCT AGAGTACACG TCTGGCGAAA TTAAGATCAC GCTAGAGGCT AAGGCCTCCG GGTCAGTGCC GTCCTTGAGT GCCATTGACT TCTCCGGCCT TGGACGACAT GTAGAGGATC ATCAGGCTCA AGGATGCCTG CTCGTCGCAC CGTCATATCC AGGAAGCTCC AAGGGAGACG ATGCAGCGGC GGCCAAGAGT GCCGTCCAAC AACGTGTTTC ATGCTGGACG GTGGAACAGC TCGCGCGTGT TGTTGCGGCC GCAGACCATT TGCATCTCAA TGCTCGCAAT GTCCTAGATA TTGTCCTAAC GGCGTTTACG CCGGTCGACG TCACTGCCGC CATAGAGAAA CTTCTCGCGA CTCCACAGGA AGGCTCTAGA GAACTTTATC GTGCAATCGT GGATGCGTTG AAATCACTAG ATAGTCGCCT ACCTGGCACA CAGCGAAACA TTCATCATAT TGCGGCAGAA GTGTCACGGA CTGAAGAATT CTCCAACCTT CGGATCGAAG AGCTCACCAC TGCGGTTCGC AACGTAGCAG GCGCCAGCCA AGGAGCCCTC ACACTCCGCG ATGAACGCTT GATTGTAAAT ACATCAATCG ACGAGTTGAA ACTGCGCCTC GGTGGCATCC TAGGCACCTC GTCCACTACT CGCCGAAAGA GCACATTTCG AGCAGAGGAA TGA
|
Protein sequence | MQMRHRWNEG DRPVAVPVGL ALEQAGSSEP GLEVVLSHEL VALLSEQLYQ SPLKAIEELV VNAYDADALR CSAAIPALGS ASVDIMLIID NGAGMDHEGL KDLWHVGHST KRSERIATIR KRKQIGKFGI GKLATYAIAN RVTYVTKTEA GGILTTSLDF SRFESDPTGG RDPLHLAVTK IRPGAILDNK LLVDTMIDAG VDPSQFIEAR SWTIVILEEL KPKAQGLKLG RLNWILSTAM PLRGTFNLYL NGDQIVSSKE DYERVASFKI SELPDNRLKG LEKSTGEKWI VDGESVRCAS FPRGISGNVI VTRRTIFAGK SSDLGRSHGF FIRVLDRLVN LEDPLFGMRP LSYETFNRFR ADVDVDDLDE WLTAPRESVE SSPQMEALWS LLEELYYEAR SRYKAWQTEQ EKPEKQKPEH DRQPVDPRYL DDPIADVLSQ SDQFETGTTD SGLTLPFEDP LRSPGVDADD EWFYLKIPAD ADIKRLIESA YSSRVARKYS YQTIKAGSTG RLVKFDPVGA LFEINADHPL VRAHADSAAE PLLEDIVTAE ALLEVYLREQ GMRAEIIGEI LERRDQLFRA LTKDRTYSFA GIAGELRESA SDERELEINL VLAARALGFV AKHISGANEP DGVARFLEYT SGEIKITLEA KASGSVPSLS AIDFSGLGRH VEDHQAQGCL LVAPSYPGSS KGDDAAAAKS AVQQRVSCWT VEQLARVVAA ADHLHLNARN VLDIVLTAFT PVDVTAAIEK LLATPQEGSR ELYRAIVDAL KSLDSRLPGT QRNIHHIAAE VSRTEEFSNL RIEELTTAVR NVAGASQGAL TLRDERLIVN TSIDELKLRL GGILGTSSTT RRKSTFRAEE
|
| |