Gene Franean1_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1057 
Symbol 
ID5669471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1240596 
End bp1241276 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID641239986 
Producttellurium resistance protein TerA 
Protein accessionYP_001505419 
Protein GI158312911 
COG category[R] General function prediction only 
COG ID[COG4110] Uncharacterized protein involved in stress response 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.614683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.916687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG ACTACAGCAA ACGACCCGCC GCACCGGCGG CGGGGCCGCC GGTGTCGCTG 
AGCAAGGTCA CGCTGACCAA GTCCACGCCG ACCGTGTCGC TGAGCAAGCA GGGTGGCGGC
GGGCGGCTGC ACGTCAACCT GAACTGGAAC CAGACCGGGA CCGGCGGCGG CGGCGGGGGT
AAGGGCGGCT TCCTCAAGCG GGTGCTCAGC GCCGGCAACG GCGGCATCGA CCTCGACCTG
GCCTGCCTGT TCGAGCTGGC GGACGGCCGT TCCGGCGTGG TCCAGGCGCT CGGCAACGCC
TTCGGCTCGT TCGACAACCC GCCGTACGTC AACCTCGACG CCGACGACCG GACCGGGGCC
GCAGCCGGCG GTGAGAACCT GCACGTCAAC CTCGCCCGGA TCGGTGAGAT CCGTCGCCTG
CTGGTCTTCG CCTTCATCTA CGAGGGCGTG GCCTCCTTCG ACCAGGCCGA CGCCGTGGTG
ACGCTGACCC CGGCCCAGGG CGCGCCGATC GAGGTCCGCC TCGACGAGCG GGCCGGCGGC
GCCCGGATGT GCGCGATCGC GCTGCTGACG AACACCGGTG GTGACTTCTC CGTCAGCCGG
GAGGTCCGGT ATGTCAGCGG GCACCGCGAG CTGGACAAGG CGTACTCGTG GGGCCTGGAC
TGGACCGCTG GCCGCAAGTG A
 
Protein sequence
MGIDYSKRPA APAAGPPVSL SKVTLTKSTP TVSLSKQGGG GRLHVNLNWN QTGTGGGGGG 
KGGFLKRVLS AGNGGIDLDL ACLFELADGR SGVVQALGNA FGSFDNPPYV NLDADDRTGA
AAGGENLHVN LARIGEIRRL LVFAFIYEGV ASFDQADAVV TLTPAQGAPI EVRLDERAGG
ARMCAIALLT NTGGDFSVSR EVRYVSGHRE LDKAYSWGLD WTAGRK