| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0715 |
|---|
| Symbol | |
|---|
| ID | 5669131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 831541 |
|---|
| End bp | 832806 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641239642 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001505079 |
|---|
| Protein GI | 158312571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.548307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.202606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATGG ACGACATGAT TCTGCTGAGC ATCGACGACC ACGTGATCGA GCCGCCGGAC
ATGTACAAGA ACCATGTCCC GGCGAAGTGG CTCGATTCCG TGCCGAAGGT CGTCCGGAAC
GAGGCCGGCG TCGACGAGTG GGTGTTCCAG GGCGAGAAGA CGTCCACACC GTTCGGTATG
GCGGCGACCG TCGGCTGGCA CCGGGAGGAG TGGGGATTCA ACCCCGGCGC CTTCACCGAG
TTACGTCCGG GCTGTTTCGA GGTCCACCAG CGGGTCCGCG ACATGAACGC CAACGGTGTC
CTCGCCTCGA TGTGCTTCCC GACGATGGCG GGCTTCAACG CCCGCACGTT CTCCGAGGCC
CTCGACAAGG ACCTCTCGCT CATCATGCTG CAGGCCTACA ACGACTGGCA CATCGACGAG
TGGTGCGGCG CCTACCCGGG CCGGTTCATC CCCCTCGGCA TCGTGCCGAT GTGGGACGTC
GAGCTCGCGG TGAAGGAGAT CCGGCGGATC GCCGCGAAGG GCTGCCGCTC CATCAGCTTC
CTGGAGGCCC CCCACGCGCA GGGCTGGCCG AGCTTCCTCT CCGGCCACTG GGACCCGATG
CTGCAGGCCC TCGTCGACGA GAACATGGTG CTCAGCCTGC ACATCGGCGG CGCCTGGGAC
ATCGTCAAGC TCGCCCCCGA GGTGCCGATC GACCACATGA TCGTCATTCC GTCCCAGCTC
ACCATGCTCA CCGCGCAGGA CCTGCTCTTC GGCCCGACAC TGCGGCGCTT CCCCGAGCTG
AAGGTGGCCC TCTCCGAGGG TGGCATCGGC TGGATCCCGT TCTACCTGGA CCGCGTCGAC
CGGCACTTCC AGAACCAGAG CTGGATCCAC AACGACTTCG GCGGCAAGCT GCCCTCCGAG
GTGTTCCGGG AGCACTTCCT GGCCTGTTAC ATCACCGACC CGGCCGGGCT GCGCCTGCGC
GAGCAGATCG GCATCGAGAC CATCGCCTGG GAGTGCGACT ACCCGCACAC CGACACGACC
TGGCCCGAGT CACCCGAGCA CGCCTGGAAC GAGCTCCAGC AGGCCGGCTG CCGCGACGAC
GAGATCCACC AGATCACCTG GGAGAACGCC AGCCGCTTCT TCGGCTGGGA CCCGTTCTCC
CACACGCCGA GGGAGCAGGC CACCGTGGGC GCGCTGCGCG GGCTGGCCGC CGATGTCGAC
GTCACCCGGA TGTCGCGCGA GGAGTGGCGC AAGCGCAACG AGGCCGCGGG AATCGGCGTC
TTCTAA
|
|---|
| Protein sequence | MHMDDMILLS IDDHVIEPPD MYKNHVPAKW LDSVPKVVRN EAGVDEWVFQ GEKTSTPFGM
AATVGWHREE WGFNPGAFTE LRPGCFEVHQ RVRDMNANGV LASMCFPTMA GFNARTFSEA
LDKDLSLIML QAYNDWHIDE WCGAYPGRFI PLGIVPMWDV ELAVKEIRRI AAKGCRSISF
LEAPHAQGWP SFLSGHWDPM LQALVDENMV LSLHIGGAWD IVKLAPEVPI DHMIVIPSQL
TMLTAQDLLF GPTLRRFPEL KVALSEGGIG WIPFYLDRVD RHFQNQSWIH NDFGGKLPSE
VFREHFLACY ITDPAGLRLR EQIGIETIAW ECDYPHTDTT WPESPEHAWN ELQQAGCRDD
EIHQITWENA SRFFGWDPFS HTPREQATVG ALRGLAADVD VTRMSREEWR KRNEAAGIGV
F
|
|---|
| |