Gene Franean1_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0639 
Symbol 
ID5669056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp743697 
End bp744374 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID641239566 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001505004 
Protein GI158312496 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.56971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.569972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGAC TCGACCGCGA TGGTGACGTG TTCGTCCTGA GCCTGGGCGA CGGGGAGAAC 
CGGCTGAACC CGGCCGCGGT CGCCGCCATC AACGCCCGCC TCGACGAGGT GACCGCCGCG
GCCGGGCCGA AAGCGCTGGT AACGACCGCC GAGGGCAAGT TCTGGAGCAA CGGGTTCGAC
CTCGCGTGGA TGACCGCGAA CCCCGGTGAG ATCGGGCCGT TCATCCAGTC GGTGCGGGTG
CTGTTCGCGC GGATGGTGAC GCTGGCGCTG CCGACCGTCG CCGCGGTCGG CGGGCACGCC
TTCGGCGCCG GGGCCGTTCT CGCGCTGACC CACGACCAAC AGGTCATGCG GGTCGACCGG
GGCTACTTCT GTCTGCCCGA GGTCGACGTC GACATCCCCT TCAGCATCGG GATCACCGAG
CTGATCCGGG CGCGCATGCC GGTGCGCACG GCGCACGAGG CGATGACGAC CGGCCGCAGG
TACGGCGGCG ACGACGCACT CGCGGCCGGC ATCATCGACG GCGTCGCCGA CCAGGAGAAG
GTCCTGGCGA CGGCGATCGC GATGGCCCGC CCGCTCACCG GCAAAGCGTC ACGGACACTG
GGGACCATCA AGTCGAGGCT GTACGCGACC GCGGTCGCGG GCCTCGTGTC GGGCGAGGCC
GTCGAGGTCC CGGTCTGA
 
Protein sequence
MAGLDRDGDV FVLSLGDGEN RLNPAAVAAI NARLDEVTAA AGPKALVTTA EGKFWSNGFD 
LAWMTANPGE IGPFIQSVRV LFARMVTLAL PTVAAVGGHA FGAGAVLALT HDQQVMRVDR
GYFCLPEVDV DIPFSIGITE LIRARMPVRT AHEAMTTGRR YGGDDALAAG IIDGVADQEK
VLATAIAMAR PLTGKASRTL GTIKSRLYAT AVAGLVSGEA VEVPV