Gene Franean1_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0625 
Symbol 
ID5669042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp725322 
End bp726359 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID641239552 
Producthypothetical protein 
Protein accessionYP_001504990 
Protein GI158312482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC CGGGTGGCCC CGCGCCATGG GACGAGGAGG TCGCGCGATC GCCTGAGTGG 
CTCACCGCGG TACTGGGTGA GTCGTGGCCC GGGGCGGTCG TCACCGGCAC GACGGTGACG
CAGCGGCTGC AGACCGTCGC GACGAAGGTG CGCTTCCAGG TCGGGTACGC ACAGGCGGTC
GACGGCGCGC CGGCGGCGCT GTGCGCCAAG GGGTACTTCA ATCCCGCCGT GCGCGGGCGA
GGCACCCGTG TCGAGGCCGA CTTCTACCGG CAGTGCGCCT CCACCCTGCC GGTGCGGACC
CCGCCGTGCG TGCACGCCGC GGTCGACGAG GAGACGAACC ACGCGCTCGT CCTGATGGAG
GACCTGGTCG AGGCCGGCGC CACCTTCCTC GACCCGCTCG TGGGTTACAA CGCCGAACAG
GCCACCGGCA CGCTCGACCA GCTCGCCTCG CTACACGCGG CGACGTGGGA GGACAAGGGC
GAGCTGACGG CCGCGTTCCC GCCCCGGCTC GCGTCGCTCG CCCGGGTCCT GACGCCCGAG
CAGCTCCAGA CCCAGCTCGA CGACGGCCGG GTGCCGGCGG TGCCGGATGA CGTCCGCCGC
GCGGACCGGC TGCTGGCGGC GATGGGCAGA CTGGCCGGGA TCAGCGACCA GCCGCGTTGT
CTCGTCCACG GAGACCTGCA CACCGGCAAC GTCTACGAGC TGGCCGACGG TTCCCCGGGG
CTCATCGACT GGCAGGTCGC CCAGCACGGC GTGTGGGCGT TGGACGTCGG CTACCACCTG
GCGGCGGTCC TGGACCCCGA TGAGCGGGCC CGCTCGGAAC GCGACCTGCT CGACCACTAC
CTCGGACGGC TGGCCGCCCA CGGCGTCACC CCGCCCGCGC GCGACGACGC CTGGTGGGCG
TACCGGGCAC ATCTGCCCTA CGGCTTCTAC CTGTGGGCGA TCACCCGAGC GGTGGACCGC
CCGATCATCG AGCACCTGAC CGGACGACTC GGCCTCGCTG TGGCCCACCA CGGAAGCCTG
GACCTACTCG GAGTCTGA
 
Protein sequence
MSIPGGPAPW DEEVARSPEW LTAVLGESWP GAVVTGTTVT QRLQTVATKV RFQVGYAQAV 
DGAPAALCAK GYFNPAVRGR GTRVEADFYR QCASTLPVRT PPCVHAAVDE ETNHALVLME
DLVEAGATFL DPLVGYNAEQ ATGTLDQLAS LHAATWEDKG ELTAAFPPRL ASLARVLTPE
QLQTQLDDGR VPAVPDDVRR ADRLLAAMGR LAGISDQPRC LVHGDLHTGN VYELADGSPG
LIDWQVAQHG VWALDVGYHL AAVLDPDERA RSERDLLDHY LGRLAAHGVT PPARDDAWWA
YRAHLPYGFY LWAITRAVDR PIIEHLTGRL GLAVAHHGSL DLLGV