| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4413 |
|---|
| Symbol | |
|---|
| ID | 3907388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5277133 |
|---|
| End bp | 5278305 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637881744 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483488 |
|---|
| Protein GI | 86743088 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0311591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCTC GCCGACCCGC ACCCCAGCGT CCCGGCACCC GCCCGGCACG AGTCGCCACG
CCCGGCTCTG GCGGGGGAGC CGCACGGAGC CGTCGCCGCC CGTCCGTCCA CGGATCCGAT
GGTGCCATCC CCGCCGTCGG ACCGCGGGAA CCCTGTCCCT GCGGGTCGGG CCGTCGTTAC
AAGGCGTGCC ACGGCGAGCG GAACCGGCCG GCTCCCGTGC TGCGCCCGTT CGCGGGCCGC
CGCGACGAGC CGGACCTGGT CGCCCTGCGG GAGCTGGTGC CCAGCGCCAC CGCGCCGCTG
GCCCTGGCGG CGGCCTACCT CGCCGACCAT CCCGAGCACG CCGACCGGCG CATCACGCTC
TGCACGATGC TGCCGCAGGC CGCCCCCGCC CTGGTACGCG AGGACGGCGA AATCCTGGTC
GCCCTGCAGA TCGCCCTTCC GGGTCTGGAC GTATCGCGGG ACGTCGCCGG TGCCCTGCTC
GCCGCACTCG CCGCCGAGCC GGGGAGTGCG ATCGACATCC CGCCCGCCTC CGCGCCGCGC
CTCGTGGAAC AACTGCCCGC GGGACTCGCC GGGTTGCCCC GGCTCACCGA CCTGCTGGAC
CCGGCGCCCC TGGACATCAC CGTTCATTCC GGATTCGGAT GGTGGCTGCC ACCGTCCGAC
GAGGAGAGCG GTCCGAACCC GGAGGTGGCG GTGATGCTGG AGCGCGCCAA CGCCACCGTG
GTGCCCACCG TACGGCTCAC CTCGGTGCCG GCCGCCTACT GGTGCCATCC CGGTGACCGC
TGGCACCTGC GGTGGGCGCT TCCGCTGGCC TGGCCGGGTG CGGCGGGTGC TGCGGCGGGC
ACCGACTCCG AGGCCGAGGC GGTCGCTCCC ATCGGCGCGG GCGCCGACGT CGCCCCCACC
GAGGAGGCGT TGCTGGATGC GCTGGCTCGC CTGGCCGCGG CCGAACGTCT CACGGTGGGG
GAGGGCTCCA GGTTCATCGG GTTCTTCCGC GCCGCCGGGC TCGTCGTGCC CGTCTGGGAT
CTCGCGCCCG GAAGCGAGGC GGGTAGCTGT GAGGAGCCGG CCGCCGCGCT GCGGGTGGCC
TACCAGAGGG CACTGGCCGA CACCACGGCA CTGACCGCGC ACGAACGCCG GGTGCGGGCG
GGTCTTGTTG GACGCAGCCT CACCCTGCGC TGA
|
|---|
| Protein sequence | MIARRPAPQR PGTRPARVAT PGSGGGAARS RRRPSVHGSD GAIPAVGPRE PCPCGSGRRY
KACHGERNRP APVLRPFAGR RDEPDLVALR ELVPSATAPL ALAAAYLADH PEHADRRITL
CTMLPQAAPA LVREDGEILV ALQIALPGLD VSRDVAGALL AALAAEPGSA IDIPPASAPR
LVEQLPAGLA GLPRLTDLLD PAPLDITVHS GFGWWLPPSD EESGPNPEVA VMLERANATV
VPTVRLTSVP AAYWCHPGDR WHLRWALPLA WPGAAGAAAG TDSEAEAVAP IGAGADVAPT
EEALLDALAR LAAAERLTVG EGSRFIGFFR AAGLVVPVWD LAPGSEAGSC EEPAAALRVA
YQRALADTTA LTAHERRVRA GLVGRSLTLR
|
|---|
| |